Strain Fitness in Sinorhizobium meliloti 1021 around SMc02096
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,612,845 | - | -1.3 | |||
1,612,851 | + | +1.3 | |||
1,612,851 | + | -0.3 | |||
1,612,851 | + | -2.7 | |||
1,612,852 | - | +0.8 | |||
1,612,852 | - | -2.0 | |||
1,612,852 | - | -0.3 | |||
1,612,873 | + | -2.8 | |||
1,612,874 | - | -2.8 | |||
1,612,952 | - | -0.4 | |||
1,612,961 | + | -2.3 | |||
1,612,961 | + | +2.1 | |||
1,612,962 | - | +1.7 | |||
1,612,969 | + | +3.2 | |||
1,613,052 | + | -1.3 | |||
1,613,052 | + | +1.6 | |||
1,613,053 | - | +1.0 | |||
1,613,265 | - | SMc02095 | 0.27 | +1.2 | |
1,613,265 | - | SMc02095 | 0.27 | +0.8 | |
1,613,370 | + | SMc02095 | 0.36 | +0.4 | |
1,613,371 | - | SMc02095 | 0.36 | +1.7 | |
1,613,508 | + | SMc02095 | 0.49 | +0.5 | |
1,613,509 | - | SMc02095 | 0.49 | +0.7 | |
1,613,689 | - | SMc02095 | 0.65 | -1.4 | |
1,613,740 | + | SMc02095 | 0.69 | +1.7 | |
1,613,741 | - | SMc02095 | 0.69 | +1.3 |
Or see this region's nucleotide sequence