Strain Fitness in Sinorhizobium meliloti 1021 around SMc01525

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
2,606,485	+		SMc01526	0.13	+0.7
2,606,485	+		SMc01526	0.13	+0.3
2,606,485	+		SMc01526	0.13	+0.3
2,606,486	-		SMc01526	0.13	+0.5
2,606,512	-		SMc01526	0.16	+0.8
2,606,512	-		SMc01526	0.16	-2.9
2,606,552	-		SMc01526	0.20	+1.6
2,606,610	+		SMc01526	0.25	-1.6
2,606,654	+		SMc01526	0.30	+0.7
2,606,655	-		SMc01526	0.30	+0.4
2,606,656	+		SMc01526	0.30	-1.2
2,606,657	-		SMc01526	0.30	+0.1
2,606,657	-		SMc01526	0.30	+0.7
2,606,705	+		SMc01526	0.34	+0.3
2,606,706	-		SMc01526	0.34	+0.4
2,606,706	-		SMc01526	0.34	+1.1
2,606,707	+		SMc01526	0.35	-1.9
2,606,708	-		SMc01526	0.35	+1.1
2,606,708	-		SMc01526	0.35	+1.3
2,606,810	-		SMc01526	0.44	+0.5
2,606,836	+		SMc01526	0.47	-0.8
2,606,836	+		SMc01526	0.47	+1.1
2,606,866	+		SMc01526	0.50	+0.2
2,606,866	+		SMc01526	0.50	-1.3
2,606,890	+		SMc01526	0.52	+0.9
2,606,891	-		SMc01526	0.52	+0.2
2,607,311	-				+2.2
2,607,311	-				-0.8
2,607,311	-				+0.5
2,607,444	-				+0.7
2,607,456	+				+0.1
2,607,457	-				+0.9
2,607,457	-				+0.4
2,607,457	-				+0.3
2,607,457	-				-0.2
2,607,457	-				+0.3
2,607,582	+				+2.9
2,607,582	+				-0.0
2,607,583	-				-1.0
2,607,583	-				+0.8
2,607,724	+		SMc01525	0.18	+1.0
2,607,725	-		SMc01525	0.18	+0.2
2,607,725	-		SMc01525	0.18	-1.7
2,607,773	-		SMc01525	0.21	-1.3
2,607,774	+		SMc01525	0.21	-1.8
2,607,774	+		SMc01525	0.21	-0.1
2,607,774	+		SMc01525	0.21	+1.7
2,607,775	-		SMc01525	0.21	-0.3
2,607,775	-		SMc01525	0.21	+1.2
2,607,775	-		SMc01525	0.21	-0.2
2,607,775	-		SMc01525	0.21	+0.3
2,607,775	-		SMc01525	0.21	-0.8
2,607,775	-		SMc01525	0.21	-0.6
2,607,775	-		SMc01525	0.21	+1.1
2,607,778	+		SMc01525	0.21	+1.0
2,607,779	-		SMc01525	0.21	+1.8
2,607,990	+		SMc01525	0.34	+0.3
2,607,991	-		SMc01525	0.34	+0.7
2,608,087	-		SMc01525	0.40	-0.1
2,608,115	+		SMc01525	0.42	-0.1
2,608,159	+		SMc01525	0.44	+1.8
2,608,159	+		SMc01525	0.44	+0.7
2,608,159	+		SMc01525	0.44	+1.3
2,608,160	-		SMc01525	0.44	+0.1
2,608,161	+		SMc01525	0.44	-0.4
2,608,161	+		SMc01525	0.44	+0.6
2,608,162	-		SMc01525	0.45	-1.5
2,608,162	-		SMc01525	0.45	+0.1
2,608,162	-		SMc01525	0.45	+0.4
2,608,165	-		SMc01525	0.45	+0.4
2,608,165	-		SMc01525	0.45	-0.1
2,608,165	-		SMc01525	0.45	+0.4
2,608,224	+		SMc01525	0.48	+1.4
2,608,312	-		SMc01525	0.54	+0.3
2,608,312	-		SMc01525	0.54	-0.3
2,608,461	+		SMc01525	0.63	+0.5
2,608,467	+		SMc01525	0.63	-1.2
2,608,468	-		SMc01525	0.63	+0.9
2,608,468	-		SMc01525	0.63	+1.6
2,608,707	+		SMc01525	0.78	-0.4
2,608,710	+		SMc01525	0.78	-2.9
2,608,777	+		SMc01525	0.82	-0.1
2,608,778	-		SMc01525	0.82	+0.3
2,608,779	+		SMc01525	0.82	+2.0
2,608,779	+		SMc01525	0.82	+1.2
2,608,872	+		SMc01525	0.88	+0.7
2,608,872	+		SMc01525	0.88	+1.2
2,608,873	-		SMc01525	0.88	+0.4
2,608,876	+		SMc01525	0.88	-0.3
2,608,876	+		SMc01525	0.88	-1.0
2,608,876	+		SMc01525	0.88	+0.1
2,608,877	-		SMc01525	0.88	+1.4
2,608,877	-		SMc01525	0.88	-1.2
2,608,877	-		SMc01525	0.88	-0.3
2,608,877	-		SMc01525	0.88	-1.6
2,608,877	-		SMc01525	0.88	+0.0
2,608,877	-		SMc01525	0.88	+2.5
2,608,877	-		SMc01525	0.88	+0.8
2,608,877	-		SMc01525	0.88	+2.5
2,609,063	-				+1.9
2,609,313	+		SMc01524	0.18	-1.0
2,609,314	-		SMc01524	0.18	+0.7
2,609,314	-		SMc01524	0.18	+0.3
2,609,406	-		SMc01524	0.27	+0.2
2,609,406	-		SMc01524	0.27	-0.3
2,609,687	-		SMc01524	0.54	+0.7
2,609,705	-		SMc01524	0.55	+0.6
2,609,787	+		SMc01524	0.63	-1.9
2,609,788	-		SMc01524	0.63	+0.6
2,609,788	-		SMc01524	0.63	+0.9
2,609,830	+		SMc01524	0.67	-1.0
2,609,830	+		SMc01524	0.67	-0.0
2,609,831	-		SMc01524	0.67	+0.5
2,609,831	-		SMc01524	0.67	+0.3