Strain Fitness in Sinorhizobium meliloti 1021 around SMc01215

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,707,873	+		SMc01217	0.62	-0.6
1,707,873	+		SMc01217	0.62	-0.5
1,707,874	-		SMc01217	0.63	-1.4
1,707,874	-		SMc01217	0.63	+0.4
1,707,874	-		SMc01217	0.63	-0.5
1,707,882	+		SMc01217	0.63	+0.6
1,707,950	-		SMc01217	0.68	-0.9
1,708,084	-		SMc01217	0.77	-0.4
1,708,230	+		SMc01217	0.87	-0.0
1,708,637	-		SMc01216	0.69	-0.2
1,708,639	+		SMc01216	0.70	-0.3
1,708,640	-		SMc01216	0.70	-1.7
1,708,721	-				-0.2
1,708,723	-				+0.4
1,709,368	+		SMc01215	0.15	-1.7
1,710,432	+		SMc01215	0.45	-1.5
1,711,132	-		SMc01215	0.65	+0.2
1,711,201	+		SMc01215	0.67	-0.9
1,711,546	-		SMc01215	0.77	-2.3
1,712,157	+				-1.2
1,712,369	-				-1.7
1,712,369	-				-0.9
1,712,437	+				-2.0
1,712,449	-				-2.7
1,712,449	-				-2.9
1,712,449	-				-2.5
1,712,449	-				-2.0
1,712,451	-				-1.9
1,712,451	-				-3.1
1,712,451	-				-2.7
1,712,532	+				-0.5
1,712,532	+				-0.6
1,712,533	-				+1.4
1,712,555	-				+0.3
1,712,592	+				-0.3
1,712,592	+				-0.4
1,712,593	-				-0.6
1,712,653	-				+2.6
1,712,736	-		SMc01214	0.18	-2.9
1,713,201	-		SMc01214	0.62	-0.7
1,713,241	+		SMc01214	0.66	-0.2
1,713,241	+		SMc01214	0.66	-0.5
1,713,242	-		SMc01214	0.66	+1.0
1,713,242	-		SMc01214	0.66	+2.4
1,713,242	-		SMc01214	0.66	+0.0
1,713,242	-		SMc01214	0.66	-1.1