Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01207 and SMc01206 are separated by 0 nucleotides SMc01206 and SMc01205 are separated by 448 nucleotides
SMc01207: SMc01207 - S-adenosylmethionine--tRNA ribosyltransferase-isomerase, at 1,721,115 to 1,722,197
SMc01207
SMc01206: SMc01206 - queuine tRNA-ribosyltransferase, at 1,722,198 to 1,723,328
SMc01206
SMc01205: SMc01205 - amino-acid-binding periplasmic signal peptide protein, at 1,723,777 to 1,724,532
SMc01205
Position (kb)
1722
1723
1724 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1721.350 kb on + strand, within SMc01207 at 1721.351 kb on - strand, within SMc01207 at 1721.351 kb on - strand, within SMc01207 at 1721.351 kb on - strand, within SMc01207 at 1721.351 kb on - strand, within SMc01207 at 1722.196 kb on - strand at 1722.381 kb on - strand, within SMc01206 at 1722.960 kb on - strand, within SMc01206 at 1723.216 kb on - strand at 1723.387 kb on + strand at 1723.387 kb on + strand at 1723.388 kb on - strand at 1723.388 kb on - strand at 1723.397 kb on - strand at 1723.397 kb on - strand at 1723.632 kb on + strand at 1723.689 kb on - strand at 1723.790 kb on + strand at 1723.791 kb on - strand at 1723.795 kb on - strand at 1723.995 kb on - strand, within SMc01205 at 1724.122 kb on + strand, within SMc01205 at 1724.125 kb on + strand, within SMc01205 at 1724.125 kb on + strand, within SMc01205 at 1724.126 kb on - strand, within SMc01205 at 1724.126 kb on - strand, within SMc01205 at 1724.134 kb on + strand, within SMc01205 at 1724.135 kb on - strand, within SMc01205 at 1724.140 kb on + strand, within SMc01205 at 1724.190 kb on + strand, within SMc01205 at 1724.190 kb on + strand, within SMc01205 at 1724.191 kb on - strand, within SMc01205 at 1724.281 kb on + strand, within SMc01205 at 1724.281 kb on + strand, within SMc01205 at 1724.282 kb on - strand, within SMc01205
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 1,721,350 + SMc01207 0.22 -2.1 1,721,351 - SMc01207 0.22 -2.1 1,721,351 - SMc01207 0.22 -0.9 1,721,351 - SMc01207 0.22 -1.2 1,721,351 - SMc01207 0.22 -1.9 1,722,196 - -3.2 1,722,381 - SMc01206 0.16 -2.4 1,722,960 - SMc01206 0.67 -2.1 1,723,216 - -2.5 1,723,387 + -3.0 1,723,387 + +0.4 1,723,388 - +0.3 1,723,388 - -0.7 1,723,397 - +1.3 1,723,397 - -2.8 1,723,632 + -1.5 1,723,689 - -0.9 1,723,790 + -1.1 1,723,791 - +0.1 1,723,795 - -1.2 1,723,995 - SMc01205 0.29 -0.4 1,724,122 + SMc01205 0.46 -0.2 1,724,125 + SMc01205 0.46 -0.2 1,724,125 + SMc01205 0.46 -0.4 1,724,126 - SMc01205 0.46 +0.1 1,724,126 - SMc01205 0.46 -0.1 1,724,134 + SMc01205 0.47 -0.8 1,724,135 - SMc01205 0.47 +0.5 1,724,140 + SMc01205 0.48 -1.8 1,724,190 + SMc01205 0.55 +0.3 1,724,190 + SMc01205 0.55 -0.2 1,724,191 - SMc01205 0.55 +0.9 1,724,281 + SMc01205 0.67 -2.1 1,724,281 + SMc01205 0.67 +1.5 1,724,282 - SMc01205 0.67 +0.3
Or see this region's nucleotide sequence