Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00898 and SMc00897 are separated by 151 nucleotides SMc00897 and SMc00896 are separated by 108 nucleotides SMc00896 and SMc00895 are separated by 60 nucleotides
SMc00898: SMc00898 - glutathione-regulated potassium-efflux system transmembrane protein, at 883,723 to 885,555
SMc00898
SMc00897: SMc00897 - PMBA protein, at 885,707 to 887,053
SMc00897
SMc00896: SMc00896 - sulfite biosynthesis protein, at 887,162 to 887,980
SMc00896
SMc00895: SMc00895 - hypothetical protein, at 888,041 to 888,277
SMc00895
Position (kb) 885
886
887
888 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 884.803 kb on + strand, within SMc00898 at 884.803 kb on + strand, within SMc00898 at 884.804 kb on - strand, within SMc00898 at 884.952 kb on - strand, within SMc00898 at 885.132 kb on + strand, within SMc00898 at 885.132 kb on + strand, within SMc00898 at 885.449 kb on + strand at 885.538 kb on + strand at 885.571 kb on + strand at 885.573 kb on + strand at 885.616 kb on - strand at 885.677 kb on + strand at 885.677 kb on + strand at 886.002 kb on - strand, within SMc00897 at 886.220 kb on + strand, within SMc00897 at 886.220 kb on + strand, within SMc00897 at 886.220 kb on + strand, within SMc00897 at 886.221 kb on - strand, within SMc00897 at 886.221 kb on - strand, within SMc00897 at 886.221 kb on - strand, within SMc00897 at 886.290 kb on - strand, within SMc00897 at 886.310 kb on + strand, within SMc00897 at 886.817 kb on + strand, within SMc00897 at 886.818 kb on - strand, within SMc00897 at 886.818 kb on - strand, within SMc00897 at 886.818 kb on - strand, within SMc00897 at 886.865 kb on + strand, within SMc00897 at 886.865 kb on + strand, within SMc00897 at 886.867 kb on + strand, within SMc00897 at 886.868 kb on - strand, within SMc00897 at 887.075 kb on - strand at 887.221 kb on + strand at 887.221 kb on + strand at 887.221 kb on + strand at 887.338 kb on - strand, within SMc00896 at 887.375 kb on + strand, within SMc00896 at 887.375 kb on + strand, within SMc00896 at 887.376 kb on - strand, within SMc00896 at 887.543 kb on + strand, within SMc00896 at 887.565 kb on + strand, within SMc00896 at 887.689 kb on - strand, within SMc00896 at 887.724 kb on + strand, within SMc00896 at 887.724 kb on + strand, within SMc00896 at 887.739 kb on - strand, within SMc00896 at 887.812 kb on - strand, within SMc00896 at 887.882 kb on + strand, within SMc00896 at 887.882 kb on + strand, within SMc00896
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 884,803 + SMc00898 0.59 +0.4 884,803 + SMc00898 0.59 -0.3 884,804 - SMc00898 0.59 -0.8 884,952 - SMc00898 0.67 -0.8 885,132 + SMc00898 0.77 +2.2 885,132 + SMc00898 0.77 +0.5 885,449 + -0.4 885,538 + -0.9 885,571 + -1.1 885,573 + -0.8 885,616 - -0.8 885,677 + +0.1 885,677 + +1.3 886,002 - SMc00897 0.22 -0.9 886,220 + SMc00897 0.38 -1.0 886,220 + SMc00897 0.38 -1.6 886,220 + SMc00897 0.38 -1.6 886,221 - SMc00897 0.38 -3.1 886,221 - SMc00897 0.38 -3.4 886,221 - SMc00897 0.38 -1.2 886,290 - SMc00897 0.43 -1.1 886,310 + SMc00897 0.45 -1.4 886,817 + SMc00897 0.82 -3.1 886,818 - SMc00897 0.82 -0.6 886,818 - SMc00897 0.82 -0.8 886,818 - SMc00897 0.82 -2.7 886,865 + SMc00897 0.86 -1.7 886,865 + SMc00897 0.86 -0.5 886,867 + SMc00897 0.86 -1.8 886,868 - SMc00897 0.86 +0.2 887,075 - -1.5 887,221 + -0.2 887,221 + +0.3 887,221 + +0.6 887,338 - SMc00896 0.21 +0.4 887,375 + SMc00896 0.26 +0.3 887,375 + SMc00896 0.26 -0.8 887,376 - SMc00896 0.26 -0.6 887,543 + SMc00896 0.47 +0.4 887,565 + SMc00896 0.49 +0.5 887,689 - SMc00896 0.64 +0.7 887,724 + SMc00896 0.69 -3.1 887,724 + SMc00896 0.69 +0.4 887,739 - SMc00896 0.70 -1.3 887,812 - SMc00896 0.79 +0.5 887,882 + SMc00896 0.88 +0.6 887,882 + SMc00896 0.88 +0.7
Or see this region's nucleotide sequence