Strain Fitness in Sinorhizobium meliloti 1021 around SMc00637
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,939,596 | - | SMc00638 | 0.44 | +0.2 | |
2,939,613 | + | SMc00638 | 0.46 | +1.1 | |
2,939,632 | - | SMc00638 | 0.48 | -1.2 | |
2,939,632 | - | SMc00638 | 0.48 | +3.0 | |
2,939,632 | - | SMc00638 | 0.48 | -0.3 | |
2,939,716 | + | SMc00638 | 0.59 | -0.3 | |
2,939,717 | - | SMc00638 | 0.59 | +0.4 | |
2,939,772 | + | SMc00638 | 0.65 | -0.2 | |
2,939,773 | - | SMc00638 | 0.65 | -0.8 | |
2,939,773 | - | SMc00638 | 0.65 | -0.8 | |
2,939,871 | + | SMc00638 | 0.77 | -1.8 | |
2,939,922 | + | SMc00638 | 0.83 | -1.2 | |
2,940,005 | + | +0.7 | |||
2,940,005 | + | +0.7 | |||
2,940,005 | + | -0.6 | |||
2,940,006 | - | -0.2 | |||
2,940,073 | - | -0.7 | |||
2,940,077 | + | +0.3 | |||
2,940,077 | + | +0.1 | |||
2,940,078 | - | -0.8 | |||
2,940,227 | + | -3.2 | |||
2,940,228 | - | +0.5 | |||
2,940,228 | - | +2.0 | |||
2,940,327 | + | -1.4 | |||
2,940,327 | + | -0.6 | |||
2,941,970 | - | -1.1 | |||
2,941,970 | - | -2.3 | |||
2,941,990 | - | +0.3 | |||
2,942,022 | - | +0.7 | |||
2,942,032 | - | +0.0 | |||
2,942,287 | - | -0.8 |
Or see this region's nucleotide sequence