Strain Fitness in Sinorhizobium meliloti 1021 around SMc00569
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,239,043 | + | SMc00569 | 0.33 | -1.1 | |
1,239,044 | - | SMc00569 | 0.33 | -0.3 | |
1,239,044 | - | SMc00569 | 0.33 | -2.3 | |
1,239,501 | - | SMc00570 | 0.20 | -0.1 | |
1,239,596 | + | SMc00570 | 0.29 | +0.8 | |
1,239,632 | + | SMc00570 | 0.33 | +0.1 | |
1,239,686 | + | SMc00570 | 0.38 | -0.4 | |
1,239,687 | - | SMc00570 | 0.38 | -0.1 | |
1,239,707 | + | SMc00570 | 0.40 | +0.3 | |
1,239,708 | - | SMc00570 | 0.40 | -1.2 | |
1,239,744 | - | SMc00570 | 0.43 | +1.3 | |
1,239,744 | - | SMc00570 | 0.43 | -0.1 | |
1,239,902 | + | SMc00570 | 0.58 | -0.4 | |
1,239,903 | - | SMc00570 | 0.59 | -0.7 | |
1,239,903 | - | SMc00570 | 0.59 | +0.3 | |
1,239,903 | - | SMc00570 | 0.59 | +0.2 | |
1,239,926 | + | SMc00570 | 0.61 | -1.0 | |
1,239,926 | + | SMc00570 | 0.61 | +0.2 | |
1,239,957 | - | SMc00570 | 0.64 | -0.5 | |
1,239,968 | + | SMc00570 | 0.65 | -4.3 | |
1,239,968 | + | SMc00570 | 0.65 | -0.7 | |
1,239,969 | - | SMc00570 | 0.65 | +0.6 | |
1,239,969 | - | SMc00570 | 0.65 | -0.8 | |
1,240,148 | + | SMc00570 | 0.82 | +0.4 |
Or see this region's nucleotide sequence