Strain Fitness in Sinorhizobium meliloti 1021 around SMc00233
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,798,338 | - | -0.4 | |||
1,798,338 | - | -0.9 | |||
1,798,351 | + | +1.0 | |||
1,798,352 | - | -0.7 | |||
1,798,374 | + | -1.6 | |||
1,798,391 | + | +0.2 | |||
1,798,392 | - | -0.4 | |||
1,798,392 | - | +0.7 | |||
1,798,396 | + | -0.2 | |||
1,798,396 | + | +0.3 | |||
1,798,396 | + | -1.8 | |||
1,798,397 | - | +0.2 | |||
1,798,397 | - | -0.6 | |||
1,798,505 | + | -2.6 | |||
1,798,505 | + | -2.2 | |||
1,798,505 | + | -1.2 | |||
1,798,505 | + | -1.5 | |||
1,798,506 | - | -1.3 | |||
1,798,593 | - | SMc00233 | 0.12 | -0.9 | |
1,798,717 | + | SMc00233 | 0.19 | -2.7 | |
1,798,717 | + | SMc00233 | 0.19 | -1.4 | |
1,798,819 | + | SMc00233 | 0.26 | -1.1 | |
1,798,820 | - | SMc00233 | 0.26 | -0.8 | |
1,798,820 | - | SMc00233 | 0.26 | +1.3 | |
1,798,820 | - | SMc00233 | 0.26 | +1.4 | |
1,798,820 | - | SMc00233 | 0.26 | -1.2 | |
1,799,064 | - | SMc00233 | 0.40 | -0.6 | |
1,799,087 | - | SMc00233 | 0.42 | +0.9 | |
1,799,415 | + | SMc00233 | 0.62 | -2.7 | |
1,799,604 | + | SMc00233 | 0.73 | +0.7 | |
1,799,604 | + | SMc00233 | 0.73 | +0.5 | |
1,800,146 | + | -1.5 | |||
1,800,146 | + | -2.8 | |||
1,800,164 | - | -0.5 | |||
1,800,339 | + | +2.2 | |||
1,800,361 | + | +0.0 |
Or see this region's nucleotide sequence