Strain Fitness in Sinorhizobium meliloti 1021 around SMc00006
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
987,382 | + | +0.4 | |||
987,383 | - | -1.6 | |||
987,461 | + | -2.1 | |||
987,461 | + | -1.3 | |||
987,461 | + | -0.7 | |||
987,462 | - | -2.2 | |||
987,462 | - | -3.7 | |||
987,462 | - | -2.6 | |||
987,462 | - | -1.3 | |||
987,743 | + | SMc00006 | 0.50 | -1.4 | |
987,744 | - | SMc00006 | 0.50 | -1.9 | |
987,842 | + | SMc00006 | 0.67 | -0.8 | |
987,842 | + | SMc00006 | 0.67 | -2.4 | |
987,843 | - | SMc00006 | 0.67 | -1.8 | |
988,049 | - | +1.3 | |||
988,162 | + | SMc00070 | 0.44 | +2.1 | |
988,163 | - | SMc00070 | 0.44 | +2.0 | |
988,163 | - | SMc00070 | 0.44 | +1.1 | |
988,385 | + | -1.8 | |||
988,386 | - | +0.1 | |||
988,449 | + | -0.1 | |||
988,449 | + | -1.1 | |||
988,624 | + | -0.2 |
Or see this region's nucleotide sequence