Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21412 and SM_b21413 are separated by 19 nucleotides SM_b21413 and SM_b21414 are separated by 73 nucleotides SM_b21414 and SM_b21415 are separated by 42 nucleotides
SM_b21412: SM_b21412 - hypothetical protein, at 1,341,717 to 1,342,142
_b21412
SM_b21413: SM_b21413 - hypothetical protein, at 1,342,162 to 1,342,728
_b21413
SM_b21414: SM_b21414 - amino acid decarboxylase, at 1,342,802 to 1,344,223
_b21414
SM_b21415: SM_b21415 - oxidoreductase, oxygen dependent, FAD-dependent protein, at 1,344,266 to 1,345,705
_b21415
Position (kb)
1342
1343
1344
1345 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1342.002 kb on + strand, within SM_b21412 at 1342.164 kb on - strand at 1342.183 kb on + strand at 1342.183 kb on + strand at 1342.183 kb on + strand at 1342.409 kb on - strand, within SM_b21413 at 1342.803 kb on + strand at 1343.069 kb on + strand, within SM_b21414 at 1343.070 kb on - strand, within SM_b21414 at 1343.070 kb on - strand, within SM_b21414 at 1343.307 kb on - strand, within SM_b21414 at 1343.328 kb on + strand, within SM_b21414 at 1343.329 kb on - strand, within SM_b21414 at 1343.512 kb on + strand, within SM_b21414 at 1343.534 kb on + strand at 1343.535 kb on - strand, within SM_b21414 at 1344.120 kb on + strand at 1344.120 kb on + strand at 1344.125 kb on + strand at 1344.125 kb on + strand at 1344.247 kb on - strand at 1344.424 kb on - strand, within SM_b21415 at 1344.611 kb on + strand, within SM_b21415 at 1344.611 kb on + strand, within SM_b21415 at 1344.728 kb on + strand, within SM_b21415 at 1344.728 kb on + strand, within SM_b21415 at 1344.849 kb on + strand, within SM_b21415 at 1344.849 kb on + strand, within SM_b21415 at 1344.850 kb on - strand, within SM_b21415 at 1344.973 kb on + strand, within SM_b21415 at 1344.973 kb on + strand, within SM_b21415 at 1344.974 kb on - strand, within SM_b21415 at 1344.974 kb on - strand at 1344.976 kb on - strand, within SM_b21415 at 1344.976 kb on - strand, within SM_b21415
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 1,342,002 + SM_b21412 0.67 +1.1 1,342,164 - -0.6 1,342,183 + -0.1 1,342,183 + -0.6 1,342,183 + +0.4 1,342,409 - SM_b21413 0.44 +1.4 1,342,803 + -0.4 1,343,069 + SM_b21414 0.19 +0.9 1,343,070 - SM_b21414 0.19 -1.3 1,343,070 - SM_b21414 0.19 -0.3 1,343,307 - SM_b21414 0.36 +1.2 1,343,328 + SM_b21414 0.37 -1.7 1,343,329 - SM_b21414 0.37 -2.4 1,343,512 + SM_b21414 0.50 +2.5 1,343,534 + +0.1 1,343,535 - SM_b21414 0.52 +0.7 1,344,120 + -1.2 1,344,120 + +0.3 1,344,125 + -0.5 1,344,125 + +0.8 1,344,247 - -0.0 1,344,424 - SM_b21415 0.11 +1.7 1,344,611 + SM_b21415 0.24 +0.5 1,344,611 + SM_b21415 0.24 -0.3 1,344,728 + SM_b21415 0.32 +0.2 1,344,728 + SM_b21415 0.32 -0.2 1,344,849 + SM_b21415 0.40 -1.3 1,344,849 + SM_b21415 0.40 -0.2 1,344,850 - SM_b21415 0.41 +0.2 1,344,973 + SM_b21415 0.49 +1.2 1,344,973 + SM_b21415 0.49 -0.1 1,344,974 - SM_b21415 0.49 +0.2 1,344,974 - +1.8 1,344,976 - SM_b21415 0.49 -0.4 1,344,976 - SM_b21415 0.49 +1.0
Or see this region's nucleotide sequence