Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21186 and SM_b21187 are separated by 212 nucleotides SM_b21187 and SM_b21188 are separated by 343 nucleotides
SM_b21186: SM_b21186 - 4-aminobutyrate aminotransferase, at 935,353 to 936,621
_b21186
SM_b21187: SM_b21187 - LacI family transcriptional regulator, at 936,834 to 937,664
_b21187
SM_b21188: SM_b21188 - acyltransferase, at 938,008 to 939,141
_b21188
Position (kb) 936
937
938 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 935.987 kb on + strand, within SM_b21186 at 936.168 kb on - strand, within SM_b21186 at 936.168 kb on - strand, within SM_b21186 at 936.168 kb on - strand, within SM_b21186 at 936.375 kb on - strand, within SM_b21186 at 936.375 kb on - strand, within SM_b21186 at 936.405 kb on + strand, within SM_b21186 at 936.405 kb on + strand, within SM_b21186 at 936.468 kb on + strand, within SM_b21186 at 936.468 kb on + strand, within SM_b21186 at 936.468 kb on + strand, within SM_b21186 at 936.469 kb on - strand, within SM_b21186 at 936.503 kb on + strand at 936.504 kb on - strand at 936.504 kb on - strand at 936.647 kb on + strand at 936.685 kb on + strand at 936.779 kb on - strand at 936.783 kb on - strand at 936.962 kb on + strand, within SM_b21187 at 936.963 kb on - strand, within SM_b21187 at 936.970 kb on - strand, within SM_b21187 at 936.970 kb on - strand, within SM_b21187 at 936.970 kb on - strand, within SM_b21187 at 936.970 kb on - strand, within SM_b21187 at 936.970 kb on - strand, within SM_b21187 at 936.971 kb on + strand, within SM_b21187 at 936.971 kb on + strand, within SM_b21187 at 936.971 kb on + strand, within SM_b21187 at 936.971 kb on + strand, within SM_b21187 at 936.971 kb on + strand, within SM_b21187 at 936.972 kb on - strand, within SM_b21187 at 937.548 kb on + strand, within SM_b21187 at 937.548 kb on + strand, within SM_b21187 at 937.646 kb on + strand at 937.767 kb on - strand at 937.789 kb on + strand at 937.789 kb on + strand at 937.790 kb on - strand at 937.834 kb on + strand at 937.834 kb on + strand at 937.835 kb on - strand at 937.835 kb on - strand at 937.897 kb on + strand at 937.898 kb on - strand at 938.072 kb on - strand at 938.072 kb on - strand at 938.216 kb on - strand, within SM_b21188 at 938.221 kb on + strand, within SM_b21188 at 938.222 kb on - strand, within SM_b21188 at 938.254 kb on + strand, within SM_b21188 at 938.254 kb on + strand, within SM_b21188 at 938.329 kb on + strand, within SM_b21188 at 938.329 kb on + strand, within SM_b21188 at 938.329 kb on + strand, within SM_b21188 at 938.347 kb on + strand, within SM_b21188 at 938.388 kb on + strand, within SM_b21188 at 938.388 kb on + strand, within SM_b21188 at 938.419 kb on + strand, within SM_b21188 at 938.419 kb on + strand at 938.420 kb on - strand, within SM_b21188 at 938.516 kb on - strand, within SM_b21188
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 935,987 + SM_b21186 0.50 +0.1 936,168 - SM_b21186 0.64 +0.2 936,168 - SM_b21186 0.64 +0.4 936,168 - SM_b21186 0.64 +0.4 936,375 - SM_b21186 0.81 -0.5 936,375 - SM_b21186 0.81 +1.7 936,405 + SM_b21186 0.83 -0.7 936,405 + SM_b21186 0.83 -1.2 936,468 + SM_b21186 0.88 -0.8 936,468 + SM_b21186 0.88 +0.5 936,468 + SM_b21186 0.88 -1.1 936,469 - SM_b21186 0.88 -0.0 936,503 + +0.5 936,504 - -1.9 936,504 - -0.3 936,647 + +0.1 936,685 + -0.0 936,779 - +0.2 936,783 - -0.6 936,962 + SM_b21187 0.15 -1.2 936,963 - SM_b21187 0.16 -0.6 936,970 - SM_b21187 0.16 -0.0 936,970 - SM_b21187 0.16 -0.7 936,970 - SM_b21187 0.16 -1.0 936,970 - SM_b21187 0.16 -0.2 936,970 - SM_b21187 0.16 -0.5 936,971 + SM_b21187 0.16 -2.6 936,971 + SM_b21187 0.16 -0.2 936,971 + SM_b21187 0.16 +0.0 936,971 + SM_b21187 0.16 -0.5 936,971 + SM_b21187 0.16 -3.3 936,972 - SM_b21187 0.17 -0.0 937,548 + SM_b21187 0.86 -0.4 937,548 + SM_b21187 0.86 -1.0 937,646 + +0.7 937,767 - +0.5 937,789 + -0.2 937,789 + -0.6 937,790 - -0.1 937,834 + +1.3 937,834 + -1.3 937,835 - -2.5 937,835 - +1.4 937,897 + +0.3 937,898 - +0.0 938,072 - +0.8 938,072 - +1.2 938,216 - SM_b21188 0.18 +0.9 938,221 + SM_b21188 0.19 -0.0 938,222 - SM_b21188 0.19 -0.8 938,254 + SM_b21188 0.22 +1.2 938,254 + SM_b21188 0.22 -0.7 938,329 + SM_b21188 0.28 +0.0 938,329 + SM_b21188 0.28 -0.3 938,329 + SM_b21188 0.28 +0.0 938,347 + SM_b21188 0.30 -0.5 938,388 + SM_b21188 0.34 +0.4 938,388 + SM_b21188 0.34 -0.0 938,419 + SM_b21188 0.36 +0.3 938,419 + +0.7 938,420 - SM_b21188 0.36 -1.2 938,516 - SM_b21188 0.45 +0.6
Or see this region's nucleotide sequence