Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20955
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,181,520 | - | SM_b20954 | 0.25 | +0.6 | |
1,181,670 | + | SM_b20954 | 0.39 | +0.7 | |
1,181,696 | + | SM_b20954 | 0.41 | +1.1 | |
1,181,943 | + | SM_b20954 | 0.63 | +0.3 | |
1,181,944 | - | SM_b20954 | 0.63 | +0.5 | |
1,181,946 | + | SM_b20954 | 0.64 | +1.0 | |
1,181,946 | + | SM_b20954 | 0.64 | +0.0 | |
1,181,947 | - | SM_b20954 | 0.64 | +1.5 | |
1,182,163 | - | SM_b20954 | 0.83 | +0.7 | |
1,182,163 | - | SM_b20954 | 0.83 | +1.5 | |
1,182,267 | - | +2.4 | |||
1,182,348 | + | -0.0 | |||
1,182,349 | - | +0.0 | |||
1,182,372 | - | -3.6 | |||
1,182,734 | + | SM_b20955 | 0.47 | -1.8 | |
1,182,735 | - | +0.0 | |||
1,182,821 | + | SM_b20955 | 0.57 | -3.2 | |
1,182,821 | + | SM_b20955 | 0.57 | -5.1 | |
1,182,821 | + | SM_b20955 | 0.57 | -1.0 | |
1,182,893 | + | SM_b20955 | 0.66 | -4.2 | |
1,182,930 | - | SM_b20955 | 0.71 | -3.5 | |
1,183,053 | - | SM_b20955 | 0.86 | -2.3 | |
1,183,221 | + | -2.5 | |||
1,183,221 | + | -2.1 |
Or see this region's nucleotide sequence