Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20946
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,172,765 | - | -2.7 | |||
1,172,945 | - | SM_b20946 | 0.13 | -0.3 | |
1,172,945 | - | SM_b20946 | 0.13 | -1.5 | |
1,172,945 | - | SM_b20946 | 0.13 | -0.6 | |
1,172,974 | + | SM_b20946 | 0.17 | -1.3 | |
1,173,037 | + | SM_b20946 | 0.26 | -1.2 | |
1,173,158 | + | SM_b20946 | 0.44 | -1.5 | |
1,173,230 | - | SM_b20946 | 0.54 | -2.9 | |
1,173,291 | - | SM_b20946 | 0.63 | -1.4 | |
1,173,291 | - | SM_b20946 | 0.63 | -1.5 | |
1,173,346 | + | SM_b20946 | 0.72 | -1.7 | |
1,173,347 | - | SM_b20946 | 0.72 | -2.2 | |
1,173,347 | - | SM_b20946 | 0.72 | -4.4 | |
1,173,461 | + | SM_b20946 | 0.88 | -2.1 | |
1,173,501 | - | -2.3 | |||
1,173,555 | + | -1.2 | |||
1,173,556 | - | -1.6 | |||
1,173,596 | - | -2.2 | |||
1,173,606 | + | -1.6 | |||
1,173,736 | + | -1.6 | |||
1,173,741 | + | -1.4 | |||
1,173,741 | + | -3.2 | |||
1,173,788 | - | -4.7 | |||
1,173,805 | - | -1.3 | |||
1,173,810 | + | -0.9 | |||
1,173,813 | + | -0.3 | |||
1,173,999 | + | -2.3 | |||
1,173,999 | + | -0.8 | |||
1,174,000 | - | -1.6 | |||
1,174,046 | + | -1.1 | |||
1,174,047 | - | -0.8 | |||
1,174,047 | - | -1.4 | |||
1,174,047 | - | +0.2 | |||
1,174,179 | + | -1.2 | |||
1,174,180 | - | +1.3 | |||
1,174,180 | - | +0.4 | |||
1,174,180 | - | +0.9 | |||
1,174,200 | - | +1.2 | |||
1,174,232 | + | -2.3 | |||
1,174,235 | + | +1.0 | |||
1,174,237 | + | +0.1 | |||
1,174,237 | + | -1.8 |
Or see this region's nucleotide sequence