Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20773
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,564,907 | + | SM_b20772 | 0.28 | -1.0 | |
1,565,233 | + | SM_b20772 | 0.59 | -1.3 | |
1,566,060 | - | SM_b20773 | 0.29 | -0.3 | |
1,566,257 | + | SM_b20773 | 0.58 | -2.0 | |
1,566,285 | - | SM_b20773 | 0.62 | -0.2 | |
1,566,285 | - | SM_b20773 | 0.62 | -1.5 | |
1,566,285 | - | SM_b20773 | 0.62 | -1.2 | |
1,566,564 | - | -0.8 | |||
1,566,591 | + | -1.2 | |||
1,566,592 | - | +1.2 | |||
1,566,632 | + | -0.2 | |||
1,566,632 | + | +1.3 | |||
1,566,632 | + | +0.4 | |||
1,566,633 | - | +0.2 | |||
1,566,633 | - | -0.5 | |||
1,566,634 | + | -2.6 | |||
1,566,635 | - | -0.4 | |||
1,566,648 | + | +1.0 | |||
1,567,005 | - | SM_b20774 | 0.73 | -0.5 | |
1,567,032 | + | SM_b20774 | 0.77 | -1.2 | |
1,567,078 | + | SM_b20774 | 0.86 | +2.2 | |
1,567,541 | + | +0.2 | |||
1,567,541 | + | -3.0 | |||
1,567,541 | + | +0.2 | |||
1,567,542 | - | +0.8 | |||
1,567,542 | - | +0.1 |
Or see this region's nucleotide sequence