Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20386 and SM_b20387 are separated by 1 nucleotides SM_b20387 and SM_b20388 are separated by 393 nucleotides
SM_b20386: SM_b20386 - hypothetical protein, at 397,129 to 398,865
_b20386
SM_b20387: SM_b20387 - transcriptional regulator, at 398,867 to 399,586
_b20387
SM_b20388: SM_b20388 - NADPH:quinone oxidoreductase, at 399,980 to 400,960
_b20388
Position (kb) 398
399
400 Strain fitness (log2 ratio) -2
-1
0
1
2 at 398.217 kb on + strand, within SM_b20386 at 398.217 kb on + strand, within SM_b20386 at 398.217 kb on + strand, within SM_b20386 at 398.217 kb on + strand, within SM_b20386 at 398.217 kb on + strand, within SM_b20386 at 398.217 kb on + strand, within SM_b20386 at 398.217 kb on + strand, within SM_b20386 at 398.218 kb on - strand, within SM_b20386 at 398.218 kb on - strand, within SM_b20386 at 398.218 kb on - strand, within SM_b20386 at 398.219 kb on + strand, within SM_b20386 at 398.220 kb on - strand, within SM_b20386 at 398.220 kb on - strand, within SM_b20386 at 398.302 kb on - strand, within SM_b20386 at 398.302 kb on - strand, within SM_b20386 at 398.468 kb on + strand, within SM_b20386 at 398.468 kb on + strand, within SM_b20386 at 398.469 kb on - strand, within SM_b20386 at 398.469 kb on - strand, within SM_b20386 at 398.603 kb on + strand, within SM_b20386 at 398.646 kb on - strand, within SM_b20386 at 399.057 kb on + strand, within SM_b20387 at 399.131 kb on + strand, within SM_b20387 at 399.153 kb on - strand, within SM_b20387 at 399.570 kb on - strand at 399.570 kb on - strand at 399.880 kb on + strand at 399.981 kb on + strand at 399.981 kb on + strand at 399.982 kb on - strand at 400.066 kb on - strand at 400.066 kb on - strand at 400.158 kb on + strand, within SM_b20388 at 400.158 kb on + strand, within SM_b20388 at 400.159 kb on - strand, within SM_b20388 at 400.193 kb on + strand, within SM_b20388 at 400.220 kb on + strand, within SM_b20388 at 400.228 kb on + strand, within SM_b20388 at 400.228 kb on + strand, within SM_b20388 at 400.265 kb on + strand, within SM_b20388 at 400.311 kb on - strand at 400.377 kb on + strand, within SM_b20388 at 400.378 kb on - strand, within SM_b20388 at 400.450 kb on + strand, within SM_b20388 at 400.451 kb on - strand, within SM_b20388 at 400.464 kb on + strand, within SM_b20388 at 400.489 kb on - strand, within SM_b20388 at 400.539 kb on - strand, within SM_b20388
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 398,217 + SM_b20386 0.63 -1.1 398,217 + SM_b20386 0.63 +0.1 398,217 + SM_b20386 0.63 -0.1 398,217 + SM_b20386 0.63 -1.4 398,217 + SM_b20386 0.63 +0.6 398,217 + SM_b20386 0.63 +1.7 398,217 + SM_b20386 0.63 +1.9 398,218 - SM_b20386 0.63 +0.4 398,218 - SM_b20386 0.63 +0.1 398,218 - SM_b20386 0.63 -1.2 398,219 + SM_b20386 0.63 -1.1 398,220 - SM_b20386 0.63 +0.8 398,220 - SM_b20386 0.63 -2.4 398,302 - SM_b20386 0.68 -0.9 398,302 - SM_b20386 0.68 -1.0 398,468 + SM_b20386 0.77 -1.7 398,468 + SM_b20386 0.77 -0.4 398,469 - SM_b20386 0.77 -0.3 398,469 - SM_b20386 0.77 -0.9 398,603 + SM_b20386 0.85 -1.1 398,646 - SM_b20386 0.87 +0.9 399,057 + SM_b20387 0.26 +1.8 399,131 + SM_b20387 0.37 +2.0 399,153 - SM_b20387 0.40 +0.2 399,570 - -1.1 399,570 - +1.6 399,880 + -1.2 399,981 + -0.1 399,981 + +0.7 399,982 - -0.2 400,066 - -1.3 400,066 - +0.7 400,158 + SM_b20388 0.18 +1.8 400,158 + SM_b20388 0.18 +0.1 400,159 - SM_b20388 0.18 +1.1 400,193 + SM_b20388 0.22 -0.5 400,220 + SM_b20388 0.24 -0.9 400,228 + SM_b20388 0.25 -0.7 400,228 + SM_b20388 0.25 +0.7 400,265 + SM_b20388 0.29 +1.5 400,311 - +1.4 400,377 + SM_b20388 0.40 -1.1 400,378 - SM_b20388 0.41 -0.9 400,450 + SM_b20388 0.48 +0.3 400,451 - SM_b20388 0.48 +0.1 400,464 + SM_b20388 0.49 +0.1 400,489 - SM_b20388 0.52 -0.6 400,539 - SM_b20388 0.57 +1.5
Or see this region's nucleotide sequence