Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20149 and SM_b20150 are separated by 317 nucleotides SM_b20150 and SM_b20151 are separated by 65 nucleotides SM_b20151 and SM_b20152 overlap by 7 nucleotides
SM_b20149: SM_b20149 - hypothetical protein, at 164,391 to 165,422
_b20149
SM_b20150: SM_b20150 - inositol monophosphatase, at 165,740 to 166,579
_b20150
SM_b20151: SM_b20151 - hypothetical protein, at 166,645 to 167,262
_b20151
SM_b20152: SM_b20152 - hypothetical protein, at 167,256 to 168,974
_b20152
Position (kb) 165
166
167 Strain fitness (log2 ratio) -2
-1
0
1
2 at 164.834 kb on + strand, within SM_b20149 at 164.834 kb on + strand, within SM_b20149 at 164.835 kb on - strand, within SM_b20149 at 164.835 kb on - strand, within SM_b20149 at 165.348 kb on - strand at 165.918 kb on + strand, within SM_b20150 at 165.919 kb on - strand, within SM_b20150 at 165.919 kb on - strand, within SM_b20150 at 165.984 kb on + strand, within SM_b20150 at 165.985 kb on - strand, within SM_b20150 at 166.130 kb on + strand, within SM_b20150 at 166.360 kb on + strand, within SM_b20150 at 166.528 kb on - strand at 166.817 kb on - strand, within SM_b20151 at 166.877 kb on + strand, within SM_b20151 at 166.878 kb on - strand, within SM_b20151 at 166.886 kb on - strand, within SM_b20151 at 166.886 kb on - strand, within SM_b20151 at 166.886 kb on - strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.943 kb on - strand, within SM_b20151 at 166.943 kb on - strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.946 kb on - strand, within SM_b20151 at 166.946 kb on - strand, within SM_b20151 at 166.950 kb on - strand, within SM_b20151 at 167.098 kb on + strand, within SM_b20151 at 167.098 kb on + strand, within SM_b20151 at 167.491 kb on - strand, within SM_b20152 at 167.575 kb on - strand, within SM_b20152 at 167.575 kb on - strand, within SM_b20152
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 164,834 + SM_b20149 0.43 -1.3 164,834 + SM_b20149 0.43 -1.8 164,835 - SM_b20149 0.43 +0.5 164,835 - SM_b20149 0.43 +1.4 165,348 - +0.3 165,918 + SM_b20150 0.21 +0.4 165,919 - SM_b20150 0.21 -1.6 165,919 - SM_b20150 0.21 -2.5 165,984 + SM_b20150 0.29 -1.3 165,985 - SM_b20150 0.29 +0.6 166,130 + SM_b20150 0.46 +0.6 166,360 + SM_b20150 0.74 -2.2 166,528 - +0.1 166,817 - SM_b20151 0.28 +0.1 166,877 + SM_b20151 0.38 -1.0 166,878 - SM_b20151 0.38 -1.2 166,886 - SM_b20151 0.39 -0.9 166,886 - SM_b20151 0.39 -0.1 166,886 - SM_b20151 0.39 -0.6 166,942 + SM_b20151 0.48 +0.7 166,942 + SM_b20151 0.48 -0.1 166,942 + SM_b20151 0.48 +1.8 166,942 + SM_b20151 0.48 +1.1 166,943 - SM_b20151 0.48 +0.2 166,943 - SM_b20151 0.48 -0.4 166,945 + SM_b20151 0.49 -0.3 166,945 + SM_b20151 0.49 -1.0 166,945 + SM_b20151 0.49 -0.9 166,945 + SM_b20151 0.49 -0.7 166,945 + SM_b20151 0.49 +1.3 166,946 - SM_b20151 0.49 -1.5 166,946 - SM_b20151 0.49 +0.4 166,950 - SM_b20151 0.49 -1.2 167,098 + SM_b20151 0.73 +0.1 167,098 + SM_b20151 0.73 -0.3 167,491 - SM_b20152 0.14 +1.7 167,575 - SM_b20152 0.19 -1.1 167,575 - SM_b20152 0.19 -0.6
Or see this region's nucleotide sequence