Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4384

Experiment: Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03 mg/ml
5,111,162	+		Pf6N2E2_4383	0.47	+2.9
5,111,162	+		Pf6N2E2_4383	0.47	+1.5
5,111,163	-		Pf6N2E2_4383	0.47	-2.3
5,111,163	-		Pf6N2E2_4383	0.47	-0.6
5,111,163	-		Pf6N2E2_4383	0.47	-2.1
5,111,174	+		Pf6N2E2_4383	0.48	+2.1
5,111,223	+		Pf6N2E2_4383	0.51	+2.3
5,111,224	-		Pf6N2E2_4383	0.51	-2.2
5,111,224	-		Pf6N2E2_4383	0.51	-2.3
5,111,224	-		Pf6N2E2_4383	0.51	-3.5
5,111,224	-		Pf6N2E2_4383	0.51	-3.3
5,111,224	-		Pf6N2E2_4383	0.51	-2.1
5,111,249	+		Pf6N2E2_4383	0.53	+2.3
5,111,249	+		Pf6N2E2_4383	0.53	+2.2
5,111,249	+		Pf6N2E2_4383	0.53	+2.0
5,111,249	+		Pf6N2E2_4383	0.53	+2.5
5,111,250	-		Pf6N2E2_4383	0.53	-4.3
5,111,526	+		Pf6N2E2_4383	0.71	+1.6
5,111,526	+		Pf6N2E2_4383	0.71	+2.3
5,111,527	-		Pf6N2E2_4383	0.71	-3.1
5,111,600	+		Pf6N2E2_4383	0.76	+2.0
5,111,600	+		Pf6N2E2_4383	0.76	+2.7
5,111,601	-		Pf6N2E2_4383	0.76	-3.5
5,111,601	-		Pf6N2E2_4383	0.76	-0.9
5,111,604	+		Pf6N2E2_4383	0.77	+2.6
5,111,604	+		Pf6N2E2_4383	0.77	+2.7
5,111,604	+		Pf6N2E2_4383	0.77	+2.5
5,111,604	+		Pf6N2E2_4383	0.77	+3.0
5,111,604	+		Pf6N2E2_4383	0.77	+2.6
5,111,604	+		Pf6N2E2_4383	0.77	+2.3
5,111,604	+		Pf6N2E2_4383	0.77	+2.4
5,111,604	+		Pf6N2E2_4383	0.77	+2.1
5,111,605	-		Pf6N2E2_4383	0.77	-1.6
5,111,605	-		Pf6N2E2_4383	0.77	-1.3
5,111,605	-		Pf6N2E2_4383	0.77	-3.4
5,111,605	-		Pf6N2E2_4383	0.77	-3.1
5,111,605	-		Pf6N2E2_4383	0.77	-0.6
5,111,605	-		Pf6N2E2_4383	0.77	-1.6
5,111,771	+		Pf6N2E2_4383	0.88	+2.3
5,111,771	+		Pf6N2E2_4383	0.88	+2.3
5,111,772	-		Pf6N2E2_4383	0.88	-3.8
5,111,832	+				+1.8
5,111,832	+				+2.9
5,111,832	+				+2.0
5,111,920	-				-2.0
5,111,920	-				-3.9
5,111,920	-				-1.6
5,111,920	-				-3.4
5,111,920	-				-1.7
5,111,920	-				-4.4
5,111,920	-				-1.7
5,111,984	+				+3.0
5,112,028	+				+2.1
5,112,029	-				-3.8
5,112,115	+				+2.6
5,112,115	+				+2.2
5,112,115	+				+2.5
5,112,115	+				+3.1
5,112,115	+				+2.2
5,112,116	-				-2.6
5,112,116	-				-2.9
5,112,116	-				-4.8
5,112,116	-				-4.1
5,112,116	-				-3.3
5,112,116	-				-2.6
5,112,153	+				-3.6
5,112,153	+				-2.5
5,112,154	-				-3.4
5,112,154	-				-4.7
5,112,244	-				-2.8
5,112,364	+		Pf6N2E2_4384	0.20	-4.1
5,112,365	-		Pf6N2E2_4384	0.20	-3.5
5,112,546	+		Pf6N2E2_4384	0.36	-4.2
5,112,547	-		Pf6N2E2_4384	0.36	-1.6
5,112,547	-		Pf6N2E2_4384	0.36	-2.7
5,112,607	-		Pf6N2E2_4384	0.41	-3.7
5,112,649	+		Pf6N2E2_4384	0.45	-2.1
5,112,649	+		Pf6N2E2_4384	0.45	-3.6
5,112,650	-		Pf6N2E2_4384	0.45	-2.4
5,112,698	+		Pf6N2E2_4384	0.49	-3.3
5,112,699	-		Pf6N2E2_4384	0.49	+0.1
5,112,699	-		Pf6N2E2_4384	0.49	-3.9
5,112,699	-		Pf6N2E2_4384	0.49	-1.8
5,112,804	+		Pf6N2E2_4384	0.58	+0.6
5,112,804	+		Pf6N2E2_4384	0.58	-3.6
5,112,805	-		Pf6N2E2_4384	0.58	-2.4
5,112,805	-		Pf6N2E2_4384	0.58	-4.5
5,112,835	+		Pf6N2E2_4384	0.61	-3.7
5,112,835	+		Pf6N2E2_4384	0.61	-1.9
5,112,835	+		Pf6N2E2_4384	0.61	-2.2
5,112,835	+		Pf6N2E2_4384	0.61	-4.6
5,112,836	-		Pf6N2E2_4384	0.61	-3.5
5,112,836	-		Pf6N2E2_4384	0.61	-2.3
5,112,958	+		Pf6N2E2_4384	0.72	-4.8
5,113,015	+		Pf6N2E2_4384	0.77	-2.5
5,113,016	-		Pf6N2E2_4384	0.77	-2.7
5,113,404	-				-0.7
5,113,404	-				-1.0
5,113,547	+				+0.1
5,113,547	+				+0.1
5,113,548	-				-1.0
5,113,548	-				-1.6
5,113,548	-				-0.9
5,113,548	-				-1.3
5,113,751	+		Pf6N2E2_4385	0.22	+0.7
5,113,751	+		Pf6N2E2_4385	0.22	+0.5
5,113,751	+		Pf6N2E2_4385	0.22	+0.3
5,113,751	+		Pf6N2E2_4385	0.22	+0.5
5,113,751	+		Pf6N2E2_4385	0.22	-0.4
5,113,751	+		Pf6N2E2_4385	0.22	-0.0
5,113,752	-		Pf6N2E2_4385	0.22	-1.3
5,113,752	-		Pf6N2E2_4385	0.22	-2.2
5,113,752	-		Pf6N2E2_4385	0.22	-1.1
5,113,752	-		Pf6N2E2_4385	0.22	-1.0
5,113,937	+		Pf6N2E2_4385	0.34	+0.9
5,113,937	+		Pf6N2E2_4385	0.34	+0.6
5,113,937	+		Pf6N2E2_4385	0.34	+0.1
5,113,937	+		Pf6N2E2_4385	0.34	+0.2
5,113,937	+		Pf6N2E2_4385	0.34	-0.5
5,113,938	-		Pf6N2E2_4385	0.34	-1.8
5,113,938	-		Pf6N2E2_4385	0.34	-1.2
5,113,938	-		Pf6N2E2_4385	0.34	-0.1
5,113,938	-		Pf6N2E2_4385	0.34	-0.8
5,113,967	+		Pf6N2E2_4385	0.36	-0.1
5,114,168	+		Pf6N2E2_4385	0.49	+0.5
5,114,169	-		Pf6N2E2_4385	0.49	+0.2