Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4382

Experiment: Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.03 mg/ml
5,109,565	+		Pf6N2E2_4381	0.39	+1.5
5,109,566	-		Pf6N2E2_4381	0.39	+0.9
5,109,566	-		Pf6N2E2_4381	0.39	+0.9
5,109,655	+		Pf6N2E2_4381	0.80	+0.9
5,109,655	+		Pf6N2E2_4381	0.80	+1.3
5,109,656	-		Pf6N2E2_4381	0.80	+0.9
5,109,656	-		Pf6N2E2_4381	0.80	+1.2
5,109,687	+				+0.6
5,109,698	+				+1.2
5,109,699	-				+1.3
5,109,699	-				+1.0
5,109,699	-				+1.3
5,109,699	-				+1.3
5,109,699	-				+1.1
5,109,714	+				+0.1
5,109,714	+				+1.3
5,109,714	+				+0.6
5,109,715	-				+1.4
5,109,721	-				+0.9
5,109,721	-				+0.7
5,109,779	+				+2.2
5,109,780	-				+1.3
5,109,780	-				+0.8
5,109,785	-				+0.7
5,109,785	-				+1.5
5,109,785	-				+0.4
5,109,785	-				+0.6
5,109,785	-				+1.7
5,109,807	+				+1.1
5,109,807	+				+2.0
5,109,808	-				+1.1
5,109,808	-				+1.4
5,109,808	-				+1.4
5,109,826	+				+2.2
5,109,835	+				+1.8
5,109,836	-				+1.0
5,109,836	-				+0.7
5,109,890	-				+0.9
5,109,890	-				+1.2
5,110,027	+		Pf6N2E2_4382	0.45	+1.1
5,110,027	+		Pf6N2E2_4382	0.45	+2.0
5,110,027	+		Pf6N2E2_4382	0.45	+2.7
5,110,028	-		Pf6N2E2_4382	0.45	+0.1
5,110,028	-		Pf6N2E2_4382	0.45	+0.5
5,110,028	-		Pf6N2E2_4382	0.45	+1.5
5,110,042	+		Pf6N2E2_4382	0.49	+3.1
5,110,042	+		Pf6N2E2_4382	0.49	+2.0
5,110,042	+		Pf6N2E2_4382	0.49	+2.6
5,110,042	+		Pf6N2E2_4382	0.49	+2.1
5,110,043	-		Pf6N2E2_4382	0.49	+0.6
5,110,043	-		Pf6N2E2_4382	0.49	-0.2
5,110,043	-		Pf6N2E2_4382	0.49	+1.4
5,110,043	-		Pf6N2E2_4382	0.49	+1.0
5,110,043	-		Pf6N2E2_4382	0.49	+1.8
5,110,043	-		Pf6N2E2_4382	0.49	+0.9
5,110,043	-		Pf6N2E2_4382	0.49	+1.5
5,110,043	-		Pf6N2E2_4382	0.49	+0.9
5,110,043	-		Pf6N2E2_4382	0.49	-0.7
5,110,078	-		Pf6N2E2_4382	0.59	+1.6
5,110,078	-		Pf6N2E2_4382	0.59	+1.5
5,110,111	+		Pf6N2E2_4382	0.68	+2.5
5,110,112	-		Pf6N2E2_4382	0.68	+1.7
5,110,112	-		Pf6N2E2_4382	0.68	+0.3
5,110,187	+		Pf6N2E2_4382	0.89	+2.2
5,110,266	+				+2.7
5,110,266	+				+3.0
5,110,266	+				+2.6
5,110,267	-				+0.1
5,110,267	-				+0.3
5,110,267	-				+0.3
5,110,267	-				+1.1
5,110,267	-				+0.1
5,110,272	+				+2.5
5,110,273	-				+2.2
5,110,273	-				+2.1
5,110,275	+				+2.6
5,110,275	+				+2.8
5,110,317	+				+2.8
5,110,317	+				+2.6
5,110,318	-				-1.0
5,110,319	+				+2.2
5,110,362	+				+2.0
5,110,362	+				+2.6
5,110,363	-				-2.2
5,110,403	+				+1.8
5,110,403	+				+2.6
5,110,404	-				-2.0
5,110,404	-				-3.9
5,110,404	-				-3.7
5,110,404	-				-3.0
5,110,436	+				+1.6
5,110,436	+				+2.2
5,110,437	-				-2.7
5,110,437	-				-2.6
5,110,437	-				-0.7
5,110,444	-				-3.0
5,110,444	-				-3.9
5,110,542	+				-1.3
5,110,542	+				-2.3
5,110,543	-				-3.3
5,110,543	-				-1.7
5,110,543	-				-3.3
5,110,875	+		Pf6N2E2_4383	0.28	+1.2
5,110,875	+		Pf6N2E2_4383	0.28	+2.2
5,110,876	-		Pf6N2E2_4383	0.28	-2.6
5,110,876	-		Pf6N2E2_4383	0.28	-3.6
5,111,128	-		Pf6N2E2_4383	0.45	-2.9
5,111,128	-		Pf6N2E2_4383	0.45	-3.6
5,111,162	+		Pf6N2E2_4383	0.47	+2.9
5,111,162	+		Pf6N2E2_4383	0.47	+1.5
5,111,163	-		Pf6N2E2_4383	0.47	-2.3
5,111,163	-		Pf6N2E2_4383	0.47	-0.6
5,111,163	-		Pf6N2E2_4383	0.47	-2.1
5,111,174	+		Pf6N2E2_4383	0.48	+2.1
5,111,223	+		Pf6N2E2_4383	0.51	+2.3
5,111,224	-		Pf6N2E2_4383	0.51	-2.2
5,111,224	-		Pf6N2E2_4383	0.51	-2.3
5,111,224	-		Pf6N2E2_4383	0.51	-3.5
5,111,224	-		Pf6N2E2_4383	0.51	-3.3
5,111,224	-		Pf6N2E2_4383	0.51	-2.1