Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3947
Experiment: Paraquat dichloride 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.03 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,585,024 | - | Pf6N2E2_3947 | 0.76 | -0.5 | |
4,585,071 | + | Pf6N2E2_3947 | 0.87 | -0.6 | |
4,585,074 | + | Pf6N2E2_3947 | 0.87 | -2.5 | |
4,585,146 | + | +0.1 | |||
4,585,146 | + | +0.3 | |||
4,585,146 | + | +0.3 | |||
4,585,146 | + | -0.1 | |||
4,585,146 | + | -0.1 | |||
4,585,146 | + | -0.6 | |||
4,585,147 | - | -1.2 | |||
4,585,147 | - | +0.1 | |||
4,585,147 | - | -0.2 | |||
4,585,147 | - | -0.3 | |||
4,585,147 | - | +0.2 | |||
4,585,147 | - | +0.0 | |||
4,585,147 | - | +0.7 | |||
4,585,147 | - | -0.4 | |||
4,585,180 | + | +0.2 | |||
4,585,717 | + | Pf6N2E2_3948 | 0.23 | +0.2 | |
4,585,717 | + | Pf6N2E2_3948 | 0.23 | -0.4 | |
4,585,717 | + | Pf6N2E2_3948 | 0.23 | -1.0 | |
4,585,717 | + | Pf6N2E2_3948 | 0.23 | +0.3 | |
4,585,718 | - | Pf6N2E2_3948 | 0.23 | -0.3 | |
4,585,718 | - | Pf6N2E2_3948 | 0.23 | -0.3 | |
4,585,718 | - | Pf6N2E2_3948 | 0.23 | -0.1 | |
4,585,718 | - | Pf6N2E2_3948 | 0.23 | +0.9 | |
4,585,718 | - | Pf6N2E2_3948 | 0.23 | +0.9 | |
4,585,718 | - | Pf6N2E2_3948 | 0.23 | -1.3 | |
4,585,970 | + | Pf6N2E2_3948 | 0.34 | -0.1 | |
4,585,970 | + | Pf6N2E2_3948 | 0.34 | +0.2 | |
4,585,971 | - | Pf6N2E2_3948 | 0.34 | -0.3 | |
4,585,971 | - | Pf6N2E2_3948 | 0.34 | +0.3 | |
4,585,971 | - | Pf6N2E2_3948 | 0.34 | -0.5 |
Or see this region's nucleotide sequence