Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02690 and HSERO_RS02695 are separated by 309 nucleotides HSERO_RS02695 and HSERO_RS02700 are separated by 122 nucleotides HSERO_RS02700 and HSERO_RS02705 are separated by 49 nucleotides
HSERO_RS02690: HSERO_RS02690 - taurine ABC transporter permease, at 593,935 to 595,680
_RS02690
HSERO_RS02695: HSERO_RS02695 - major facilitator transporter, at 595,990 to 597,342
_RS02695
HSERO_RS02700: HSERO_RS02700 - hypothetical protein, at 597,465 to 597,680
_RS02700
HSERO_RS02705: HSERO_RS02705 - FAD-dependent oxidoreductase, at 597,730 to 599,499
_RS02705
Position (kb) 595
596
597
598 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 595.051 kb on - strand, within HSERO_RS02690 at 595.237 kb on + strand, within HSERO_RS02690 at 595.558 kb on - strand at 595.558 kb on - strand at 595.558 kb on - strand at 595.577 kb on + strand at 595.577 kb on + strand at 595.632 kb on - strand at 595.725 kb on + strand at 595.725 kb on + strand at 596.077 kb on - strand at 596.105 kb on + strand at 596.113 kb on - strand at 596.113 kb on - strand at 596.137 kb on - strand, within HSERO_RS02695 at 596.271 kb on + strand, within HSERO_RS02695 at 596.271 kb on + strand, within HSERO_RS02695 at 596.440 kb on - strand, within HSERO_RS02695 at 596.556 kb on - strand, within HSERO_RS02695 at 596.646 kb on + strand, within HSERO_RS02695 at 597.089 kb on + strand, within HSERO_RS02695 at 597.159 kb on + strand, within HSERO_RS02695 at 597.202 kb on + strand, within HSERO_RS02695 at 597.204 kb on + strand, within HSERO_RS02695 at 597.283 kb on - strand at 597.310 kb on - strand at 597.376 kb on + strand at 597.530 kb on - strand, within HSERO_RS02700 at 597.664 kb on - strand at 597.667 kb on + strand at 597.675 kb on - strand at 597.711 kb on + strand at 597.719 kb on - strand at 597.722 kb on + strand at 597.730 kb on - strand at 598.241 kb on + strand, within HSERO_RS02705
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 595,051 - HSERO_RS02690 0.64 -0.5 595,237 + HSERO_RS02690 0.75 -2.8 595,558 - -1.3 595,558 - -0.8 595,558 - -0.5 595,577 + -0.6 595,577 + -3.0 595,632 - -0.5 595,725 + +0.3 595,725 + +0.6 596,077 - -1.4 596,105 + +0.3 596,113 - +0.9 596,113 - -0.6 596,137 - HSERO_RS02695 0.11 +0.6 596,271 + HSERO_RS02695 0.21 +2.6 596,271 + HSERO_RS02695 0.21 -0.6 596,440 - HSERO_RS02695 0.33 -0.3 596,556 - HSERO_RS02695 0.42 +1.9 596,646 + HSERO_RS02695 0.48 +0.0 597,089 + HSERO_RS02695 0.81 -0.3 597,159 + HSERO_RS02695 0.86 -0.2 597,202 + HSERO_RS02695 0.90 +1.4 597,204 + HSERO_RS02695 0.90 -2.4 597,283 - -0.2 597,310 - +0.9 597,376 + -0.5 597,530 - HSERO_RS02700 0.30 -0.7 597,664 - +1.2 597,667 + -0.3 597,675 - +0.2 597,711 + -0.1 597,719 - -0.0 597,722 + -0.3 597,730 - -0.6 598,241 + HSERO_RS02705 0.29 -1.1
Or see this region's nucleotide sequence