Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03434

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,596,867	-		CCNA_03433	0.24	+0.3
3,596,878	-		CCNA_03433	0.25	-0.4
3,596,902	-		CCNA_03433	0.27	-0.1
3,596,932	+		CCNA_03433	0.29	+0.3
3,596,943	+		CCNA_03433	0.30	-1.1
3,597,042	+		CCNA_03433	0.38	-0.8
3,597,055	-		CCNA_03433	0.39	-1.4
3,597,056	-		CCNA_03433	0.39	+0.5
3,597,058	+		CCNA_03433	0.39	+0.2
3,597,079	-		CCNA_03433	0.41	-1.7
3,597,082	+		CCNA_03433	0.41	+0.1
3,597,082	+		CCNA_03433	0.41	+0.8
3,597,082	+		CCNA_03433	0.41	-1.6
3,597,095	+		CCNA_03433	0.42	-0.6
3,597,105	+		CCNA_03433	0.43	+0.5
3,597,135	+		CCNA_03433	0.46	-1.1
3,597,143	-		CCNA_03433	0.46	-0.5
3,597,158	-		CCNA_03433	0.48	-0.3
3,597,160	+		CCNA_03433	0.48	-1.2
3,597,160	+		CCNA_03433	0.48	-1.0
3,597,160	+		CCNA_03433	0.48	-0.3
3,597,160	+		CCNA_03433	0.48	-0.6
3,597,160	+		CCNA_03433	0.48	+0.4
3,597,160	+		CCNA_03433	0.48	-0.5
3,597,168	-		CCNA_03433	0.48	-0.7
3,597,168	-		CCNA_03433	0.48	-0.8
3,597,168	-		CCNA_03433	0.48	-0.7
3,597,181	+		CCNA_03433	0.49	-1.7
3,597,189	-		CCNA_03433	0.50	-1.2
3,597,190	+		CCNA_03433	0.50	-0.6
3,597,194	-		CCNA_03433	0.50	-0.2
3,597,196	+		CCNA_03433	0.51	-0.2
3,597,202	+		CCNA_03433	0.51	+1.0
3,597,202	+				+2.3
3,597,207	+		CCNA_03433	0.52	-2.1
3,597,215	-		CCNA_03433	0.52	-0.1
3,597,217	+		CCNA_03433	0.52	-1.4
3,597,217	+		CCNA_03433	0.52	-0.2
3,597,217	+		CCNA_03433	0.52	+1.3
3,597,217	+		CCNA_03433	0.52	+0.4
3,597,217	+		CCNA_03433	0.52	-0.3
3,597,217	+		CCNA_03433	0.52	-1.1
3,597,217	+		CCNA_03433	0.52	-1.4
3,597,217	+		CCNA_03433	0.52	-0.6
3,597,217	+		CCNA_03433	0.52	+1.0
3,597,225	-		CCNA_03433	0.53	-0.6
3,597,225	-		CCNA_03433	0.53	+2.3
3,597,225	-		CCNA_03433	0.53	-2.2
3,597,225	-		CCNA_03433	0.53	-0.4
3,597,225	-		CCNA_03433	0.53	-0.1
3,597,225	-		CCNA_03433	0.53	-2.1
3,597,225	-		CCNA_03433	0.53	-1.3
3,597,225	-		CCNA_03433	0.53	-1.2
3,597,225	-		CCNA_03433	0.53	-1.4
3,597,235	+		CCNA_03433	0.54	-0.8
3,597,235	+		CCNA_03433	0.54	-0.8
3,597,235	+		CCNA_03433	0.54	-2.6
3,597,243	-		CCNA_03433	0.54	-1.4
3,597,243	-		CCNA_03433	0.54	-0.3
3,597,292	-		CCNA_03433	0.58	-2.1
3,597,370	+		CCNA_03433	0.65	+0.5
3,597,371	+		CCNA_03433	0.65	-3.3
3,597,379	-		CCNA_03433	0.66	-0.3
3,597,379	-		CCNA_03433	0.66	-1.0
3,597,384	-		CCNA_03433	0.66	-1.4
3,597,404	-		CCNA_03433	0.68	+0.5
3,597,424	+		CCNA_03433	0.69	-1.4
3,597,431	+		CCNA_03433	0.70	+0.4
3,597,432	-		CCNA_03433	0.70	-0.3
3,597,450	+		CCNA_03433	0.71	-0.6
3,597,458	-		CCNA_03433	0.72	+0.7
3,597,517	+		CCNA_03433	0.77	+1.4
3,597,539	+		CCNA_03433	0.79	+0.4
3,597,539	+		CCNA_03433	0.79	-0.7
3,597,542	-		CCNA_03433	0.79	-3.0
3,597,547	-		CCNA_03433	0.79	+0.3
3,597,583	+		CCNA_03433	0.82	+1.5
3,597,583	+		CCNA_03433	0.82	+1.3
3,597,645	-		CCNA_03433	0.87	-2.1
3,597,659	+		CCNA_03433	0.88	+0.3
3,597,667	-		CCNA_03433	0.89	-2.5
3,597,668	-		CCNA_03433	0.89	-1.1
3,597,668	-		CCNA_03433	0.89	-3.5
3,597,668	-		CCNA_03433	0.89	-1.2
3,597,694	+				+1.5
3,597,694	+				+0.0
3,597,702	-				-0.6
3,597,716	+				-1.1
3,597,750	+				+0.8
3,597,750	+				-0.5
3,597,761	+				-0.0
3,597,792	-				-0.6
3,597,797	+				+0.8
3,597,797	+				+0.7
3,597,797	+				-1.4
3,597,805	-				+0.3
3,597,805	-				-1.7
3,597,826	+				+0.4
3,597,826	+				+1.7
3,597,828	-				-0.1
3,597,828	-				-2.7
3,597,828	-				+0.1
3,597,835	+				+0.7
3,597,840	+				+0.8
3,597,842	-				-0.9
3,597,855	+				+1.0
3,597,855	-				+0.3
3,597,901	+				+2.8
3,597,911	+				+0.9
3,597,921	+				+0.3
3,597,929	-				-2.3
3,597,946	+		CCNA_03434	0.11	+0.4
3,597,946	+		CCNA_03434	0.11	+0.3
3,597,946	+		CCNA_03434	0.11	+1.8
3,597,946	+		CCNA_03434	0.11	+0.1
3,597,954	-		CCNA_03434	0.12	-1.7
3,597,954	-		CCNA_03434	0.12	-2.1
3,597,972	+		CCNA_03434	0.14	+0.2
3,598,098	-		CCNA_03434	0.30	+0.7
3,598,120	+		CCNA_03434	0.32	+0.7
3,598,123	-		CCNA_03434	0.33	-2.4
3,598,128	-		CCNA_03434	0.33	-0.4
3,598,130	-		CCNA_03434	0.33	-4.2
3,598,130	-		CCNA_03434	0.33	-2.1
3,598,138	-		CCNA_03434	0.34	+0.6
3,598,145	-		CCNA_03434	0.35	-1.8
3,598,175	+		CCNA_03434	0.39	-1.1
3,598,198	+		CCNA_03434	0.42	-0.7
3,598,199	-		CCNA_03434	0.42	-1.3
3,598,208	+		CCNA_03434	0.43	+0.4
3,598,214	+		CCNA_03434	0.44	-0.9
3,598,230	+		CCNA_03434	0.46	+0.8
3,598,230	+		CCNA_03434	0.46	-0.3
3,598,311	-		CCNA_03434	0.56	-1.9
3,598,352	+		CCNA_03434	0.61	+0.3
3,598,352	+		CCNA_03434	0.61	+0.4
3,598,359	-		CCNA_03434	0.62	-0.3
3,598,360	-		CCNA_03434	0.62	-1.8
3,598,360	-		CCNA_03434	0.62	-1.7
3,598,361	+		CCNA_03434	0.62	-0.3
3,598,361	+		CCNA_03434	0.62	+1.7
3,598,406	+		CCNA_03434	0.67	+0.0
3,598,406	+		CCNA_03434	0.67	-0.5
3,598,414	-		CCNA_03434	0.68	+0.6
3,598,420	+		CCNA_03434	0.69	-0.4
3,598,428	+		CCNA_03434	0.70	+0.8
3,598,430	-		CCNA_03434	0.70	+0.3
3,598,459	-		CCNA_03434	0.74	-1.1
3,598,509	-		CCNA_03434	0.80	-0.9
3,598,509	-		CCNA_03434	0.80	-2.3
3,598,513	+		CCNA_03434	0.81	+0.9
3,598,520	+		CCNA_03434	0.81	-0.5
3,598,528	+		CCNA_03434	0.82	+1.0
3,598,536	-		CCNA_03434	0.83	-1.1
3,598,569	-		CCNA_03434	0.87	-0.4
3,598,569	-		CCNA_03434	0.87	+0.3
3,598,573	+		CCNA_03434	0.88	-1.3
3,598,574	-		CCNA_03434	0.88	-1.3
3,598,599	-				-2.0
3,598,607	+				+1.9
3,598,627	+				+0.9
3,598,627	+				+1.3
3,598,627	+				+0.9
3,598,635	-				-0.1
3,598,635	-				-1.2
3,598,635	-				-2.3
3,598,635	-				-0.1
3,598,675	+				+0.3
3,598,683	-				-2.1
3,598,690	+				-0.0
3,598,729	+				-0.4
3,598,731	+				+0.0
3,598,735	+				-0.9
3,598,736	+				-2.3
3,598,743	-				-2.1
3,598,765	+				-0.4
3,598,774	+				+0.7
3,598,785	+		CCNA_03435	0.11	+2.3
3,598,814	+		CCNA_03435	0.13	-0.3
3,598,822	-		CCNA_03435	0.13	-1.8
3,598,822	-		CCNA_03435	0.13	-0.9
3,598,822	-		CCNA_03435	0.13	-2.2
3,598,860	+		CCNA_03435	0.16	+1.4
3,598,897	+		CCNA_03435	0.19	+0.4
3,598,905	-		CCNA_03435	0.20	-0.8
3,598,905	-		CCNA_03435	0.20	-2.1
3,598,924	+		CCNA_03435	0.21	+1.1
3,598,926	-		CCNA_03435	0.21	-0.2
3,598,926	-		CCNA_03435	0.21	-1.4
3,598,946	+		CCNA_03435	0.22	-0.2
3,598,946	-		CCNA_03435	0.22	-1.6
3,598,960	-		CCNA_03435	0.24	-1.3
3,598,960	-		CCNA_03435	0.24	-0.8
3,599,020	+		CCNA_03435	0.28	+1.1
3,599,020	+		CCNA_03435	0.28	-0.8
3,599,040	+		CCNA_03435	0.29	-0.2
3,599,040	+		CCNA_03435	0.29	+0.5
3,599,071	+		CCNA_03435	0.32	+0.1
3,599,082	-		CCNA_03435	0.32	-1.0
3,599,088	+		CCNA_03435	0.33	+1.4
3,599,093	+		CCNA_03435	0.33	+0.5
3,599,106	-		CCNA_03435	0.34	+0.1
3,599,109	+		CCNA_03435	0.34	+2.0
3,599,138	+		CCNA_03435	0.36	-0.3
3,599,138	+		CCNA_03435	0.36	-0.1
3,599,141	-		CCNA_03435	0.37	-0.5
3,599,146	-		CCNA_03435	0.37	-0.7
3,599,175	-		CCNA_03435	0.39	+1.1
3,599,182	+		CCNA_03435	0.40	-0.6
3,599,185	-		CCNA_03435	0.40	+0.0
3,599,205	+		CCNA_03435	0.41	+0.3
3,599,205	+		CCNA_03435	0.41	+0.6
3,599,213	-		CCNA_03435	0.42	+1.2
3,599,213	-		CCNA_03435	0.42	-0.2
3,599,213	-		CCNA_03435	0.42	-0.3
3,599,237	-		CCNA_03435	0.44	+1.2
3,599,239	+		CCNA_03435	0.44	-0.7
3,599,239	+		CCNA_03435	0.44	+0.4
3,599,244	+		CCNA_03435	0.44	-0.1
3,599,244	+		CCNA_03435	0.44	+0.6
3,599,249	+		CCNA_03435	0.45	+0.5
3,599,249	+		CCNA_03435	0.45	+1.0
3,599,286	-		CCNA_03435	0.47	-1.7
3,599,290	+		CCNA_03435	0.48	+0.9
3,599,306	+		CCNA_03435	0.49	+0.7
3,599,306	+		CCNA_03435	0.49	+0.4
3,599,332	+		CCNA_03435	0.51	+1.1
3,599,374	+		CCNA_03435	0.54	+1.0
3,599,404	+		CCNA_03435	0.56	-0.3
3,599,463	+		CCNA_03435	0.60	+0.8
3,599,476	-		CCNA_03435	0.61	+1.1
3,599,476	-		CCNA_03435	0.61	-1.0
3,599,488	-		CCNA_03435	0.62	-0.1
3,599,498	-		CCNA_03435	0.63	+0.5
3,599,519	+		CCNA_03435	0.64	-0.6
3,599,521	+		CCNA_03435	0.64	-0.4
3,599,555	-		CCNA_03435	0.67	+0.4
3,599,582	+		CCNA_03435	0.69	+0.1
3,599,582	+		CCNA_03435	0.69	+0.3
3,599,592	+		CCNA_03435	0.70	+1.2
3,599,594	+		CCNA_03435	0.70	+0.1
3,599,594	+		CCNA_03435	0.70	+0.4
3,599,599	+		CCNA_03435	0.70	-0.3
3,599,600	+		CCNA_03435	0.70	+0.0
3,599,600	-		CCNA_03435	0.70	+0.7
3,599,610	-		CCNA_03435	0.71	+1.0
3,599,638	+		CCNA_03435	0.73	+0.7