Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02959

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,115,120	-				+0.4
3,115,123	-				+0.9
3,115,123	-				-0.2
3,115,149	-				+1.1
3,115,153	+				-0.0
3,115,205	+				-0.5
3,115,217	+				-0.7
3,115,218	-				+1.1
3,115,264	-		CCNA_02956	0.16	+1.5
3,115,264	-		CCNA_02956	0.16	+0.5
3,115,264	-		CCNA_02956	0.16	+0.3
3,115,264	-		CCNA_02956	0.16	+0.2
3,115,264	-		CCNA_02956	0.16	+1.1
3,115,264	-		CCNA_02956	0.16	+0.2
3,115,295	-		CCNA_02956	0.22	+0.7
3,115,313	+		CCNA_02956	0.25	-1.3
3,115,326	-		CCNA_02956	0.28	+1.0
3,115,326	-		CCNA_02956	0.28	+0.6
3,115,331	-		CCNA_02956	0.28	+0.7
3,115,331	-		CCNA_02956	0.28	+1.9
3,115,347	+		CCNA_02956	0.31	-0.0
3,115,360	-		CCNA_02956	0.34	-0.9
3,115,383	+		CCNA_02956	0.38	+0.1
3,115,434	-		CCNA_02956	0.48	+1.1
3,115,444	+		CCNA_02956	0.50	-0.7
3,115,461	+		CCNA_02956	0.53	-3.0
3,115,466	+		CCNA_02956	0.54	-3.1
3,115,469	-		CCNA_02956	0.54	+0.8
3,115,469	-		CCNA_02956	0.54	+2.7
3,115,469	-		CCNA_02956	0.54	+0.9
3,115,474	-		CCNA_02956	0.55	+0.8
3,115,474	-		CCNA_02956	0.55	-0.0
3,115,480	-		CCNA_02956	0.56	+1.0
3,115,518	+		CCNA_02956	0.63	-0.3
3,115,546	+		CCNA_02956	0.69	-0.6
3,115,554	-		CCNA_02956	0.70	-0.5
3,115,566	+		CCNA_02956	0.72	-1.2
3,115,583	+		CCNA_02956	0.75	+0.0
3,115,664	+				-0.4
3,115,664	+				-1.7
3,115,667	-				+1.2
3,115,686	-				-0.8
3,115,710	+				+0.5
3,115,710	+				+0.7
3,115,735	+		CCNA_02957	0.15	-0.2
3,115,774	-		CCNA_02957	0.26	+2.6
3,115,818	-		CCNA_02957	0.38	+2.0
3,115,858	-		CCNA_02957	0.49	+4.5
3,115,881	-		CCNA_02957	0.55	+2.1
3,115,890	-		CCNA_02957	0.58	+2.8
3,115,902	-		CCNA_02957	0.61	+2.1
3,116,010	-				+0.8
3,116,106	+				+0.9
3,116,106	+				+0.6
3,116,115	-				+0.4
3,116,146	+				-1.1
3,116,187	+				+0.5
3,116,247	+		CCNA_02959	0.15	-0.1
3,116,307	-		CCNA_02959	0.22	+0.7
3,116,307	-		CCNA_02959	0.22	-0.5
3,116,333	-		CCNA_02959	0.25	-1.3
3,116,400	+		CCNA_02959	0.33	-0.4
3,116,439	-		CCNA_02959	0.38	+2.0
3,116,464	+		CCNA_02959	0.40	-0.5
3,116,464	+		CCNA_02959	0.40	-1.0
3,116,522	-		CCNA_02959	0.47	+2.4
3,116,591	+		CCNA_02959	0.55	+1.1
3,116,601	+		CCNA_02959	0.56	-0.3
3,116,604	-		CCNA_02959	0.57	-1.2
3,116,609	-		CCNA_02959	0.57	-1.7
3,116,609	-		CCNA_02959	0.57	-0.3
3,116,661	+		CCNA_02959	0.63	+0.0
3,116,661	+		CCNA_02959	0.63	-1.4
3,116,669	-		CCNA_02959	0.64	+0.2
3,116,680	+		CCNA_02959	0.66	-1.2
3,116,680	+		CCNA_02959	0.66	+0.5
3,116,688	-		CCNA_02959	0.66	-1.9
3,116,688	-		CCNA_02959	0.66	+1.1
3,116,688	-		CCNA_02959	0.66	+0.8
3,116,688	-		CCNA_02959	0.66	-1.7
3,116,776	+		CCNA_02959	0.77	-1.4
3,116,799	-		CCNA_02959	0.79	+0.3
3,116,799	-		CCNA_02959	0.79	-0.8
3,116,812	+		CCNA_02959	0.81	-2.9
3,116,815	-		CCNA_02959	0.81	+0.4
3,116,823	+		CCNA_02959	0.82	-1.6
3,116,836	+		CCNA_02959	0.84	-2.4
3,116,841	+		CCNA_02959	0.84	-0.8
3,116,844	-		CCNA_02959	0.85	-0.5
3,116,869	+		CCNA_02959	0.87	-0.7
3,116,870	+		CCNA_02959	0.88	-1.1
3,116,872	-		CCNA_02959	0.88	-0.0
3,116,878	-		CCNA_02959	0.89	+0.6
3,116,956	+				-1.0
3,116,971	+				+0.7
3,116,971	+				-0.9
3,116,971	+				+1.6
3,116,978	-				+1.6
3,116,979	-				+0.0
3,116,979	-				-0.9
3,116,979	-				-1.1
3,116,979	-				+1.6
3,116,984	-				-0.1
3,116,987	+				+1.1
3,117,023	+				+0.2
3,117,046	-				-0.6
3,117,095	+		CCNA_02960	0.16	+1.3
3,117,125	+		CCNA_02960	0.26	-0.0
3,117,160	+		CCNA_02960	0.37	-0.1
3,117,257	+		CCNA_02960	0.68	-1.4
3,117,265	+		CCNA_02960	0.70	+0.1
3,117,273	-		CCNA_02960	0.73	+1.0
3,117,337	+				-2.5
3,117,338	+				+1.6
3,117,344	-				+1.1
3,117,353	+				-0.1
3,117,503	-				+0.5
3,117,538	-				+1.3
3,117,549	+				-2.3
3,117,576	+				-0.1
3,117,576	+				+0.3
3,117,577	+				+1.5
3,117,589	+				-1.3
3,117,597	-				+2.6
3,117,597	-				+2.5
3,117,599	+				-0.8
3,117,607	-				+1.9
3,117,607	-				+1.1
3,117,607	-				+1.6
3,117,607	-				+2.1
3,117,641	+				+1.4
3,117,641	+				+1.3
3,117,656	-				+1.4
3,117,710	+		CCNA_02961	0.12	-0.5
3,117,718	-		CCNA_02961	0.13	+1.1
3,117,743	+		CCNA_02961	0.15	+0.6
3,117,751	-		CCNA_02961	0.16	+0.8
3,117,751	-		CCNA_02961	0.16	+1.3
3,117,764	+		CCNA_02961	0.17	+0.2
3,117,788	-		CCNA_02961	0.19	+1.5
3,117,793	-		CCNA_02961	0.20	+1.1
3,117,793	-		CCNA_02961	0.20	+1.3
3,117,809	+		CCNA_02961	0.21	-0.7
3,117,809	+		CCNA_02961	0.21	-0.5
3,117,817	-		CCNA_02961	0.22	+1.4
3,117,819	+		CCNA_02961	0.22	+0.1
3,117,827	-		CCNA_02961	0.23	+1.1
3,117,849	+		CCNA_02961	0.25	-0.1
3,117,849	+		CCNA_02961	0.25	+1.6
3,117,849	+		CCNA_02961	0.25	-0.2
3,117,849	+		CCNA_02961	0.25	+0.5
3,117,857	-		CCNA_02961	0.26	+1.5
3,117,857	-		CCNA_02961	0.26	+1.1
3,117,857	-		CCNA_02961	0.26	+0.5
3,117,865	+		CCNA_02961	0.27	-1.5
3,117,896	-		CCNA_02961	0.29	+0.9
3,117,902	-		CCNA_02961	0.30	+0.6
3,117,905	+		CCNA_02961	0.30	+0.5
3,117,912	+		CCNA_02961	0.31	-1.0
3,117,913	-		CCNA_02961	0.31	+1.6
3,117,951	-		CCNA_02961	0.35	+2.2