Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35130

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,482,430	+		BPHYT_RS35125	0.54	-1.8
3,483,071	-		BPHYT_RS35125	0.86	+0.1
3,483,395	+				-0.2
3,483,396	-				-0.1
3,483,533	-				+0.7
3,483,751	+		BPHYT_RS35130	0.12	-1.4
3,483,757	+		BPHYT_RS35130	0.13	-0.0
3,483,786	+		BPHYT_RS35130	0.14	-0.0
3,483,799	+		BPHYT_RS35130	0.14	-1.2
3,483,827	-		BPHYT_RS35130	0.15	-0.0
3,484,355	-		BPHYT_RS35130	0.34	+0.1
3,484,355	-		BPHYT_RS35130	0.34	-0.2
3,484,372	+		BPHYT_RS35130	0.35	+0.1
3,484,373	-		BPHYT_RS35130	0.35	+0.7
3,484,552	+		BPHYT_RS35130	0.41	-0.1
3,484,552	+		BPHYT_RS35130	0.41	+0.0
3,484,829	-		BPHYT_RS35130	0.51	-0.1
3,484,951	-		BPHYT_RS35130	0.55	+1.0
3,484,956	-		BPHYT_RS35130	0.55	-0.1
3,484,956	-		BPHYT_RS35130	0.55	-0.1
3,484,956	-		BPHYT_RS35130	0.55	-0.3
3,484,956	-		BPHYT_RS35130	0.55	+0.3
3,485,122	+		BPHYT_RS35130	0.61	+0.5
3,485,215	+		BPHYT_RS35130	0.65	+0.1
3,485,215	+		BPHYT_RS35130	0.65	+0.1
3,485,215	+		BPHYT_RS35130	0.65	-0.0
3,485,325	+		BPHYT_RS35130	0.69	-0.1
3,485,501	+		BPHYT_RS35130	0.75	-0.0
3,485,606	-		BPHYT_RS35130	0.79	+0.1
3,485,740	+		BPHYT_RS35130	0.83	+0.6
3,485,741	-		BPHYT_RS35130	0.83	-0.1
3,485,760	-		BPHYT_RS35130	0.84	+0.1
3,485,777	-		BPHYT_RS35130	0.85	-0.5
3,486,247	+				+0.0
3,486,248	-				+1.1
3,486,248	-				-0.3
3,486,257	+				+1.2
3,486,268	+				-0.7
3,486,269	-				-0.3
3,486,339	+				+0.3
3,486,340	-				+0.2
3,486,340	-				-0.1
3,486,397	+				-0.0
3,486,397	+				+0.0
3,486,764	+		BPHYT_RS35135	0.24	+0.8
3,487,016	+		BPHYT_RS35135	0.40	+0.1
3,487,016	+		BPHYT_RS35135	0.40	-0.4
3,487,038	-		BPHYT_RS35135	0.41	-0.7
3,487,133	+		BPHYT_RS35135	0.47	+0.2
3,487,134	-		BPHYT_RS35135	0.47	+1.8