Experiment: Nickel (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22745 and AO356_22750 are separated by 148 nucleotides AO356_22750 and AO356_22755 overlap by 37 nucleotides
AO356_22745: AO356_22745 - 2-nitropropane dioxygenase, at 5,079,968 to 5,081,041
_22745
AO356_22750: AO356_22750 - transcriptional regulator, at 5,081,190 to 5,081,678
_22750
AO356_22755: AO356_22755 - 6-O-methylguanine DNA methyltransferase, at 5,081,642 to 5,082,715
_22755
Position (kb)
5081
5082 Strain fitness (log2 ratio)
-2
-1
0
1 at 5080.400 kb on + strand, within AO356_22745 at 5080.401 kb on - strand, within AO356_22745 at 5080.401 kb on - strand, within AO356_22745 at 5080.500 kb on + strand, within AO356_22745 at 5080.500 kb on + strand, within AO356_22745 at 5080.500 kb on + strand, within AO356_22745 at 5080.750 kb on - strand, within AO356_22745 at 5081.079 kb on + strand at 5081.080 kb on - strand at 5081.172 kb on + strand at 5081.373 kb on + strand, within AO356_22750 at 5081.374 kb on - strand, within AO356_22750 at 5081.374 kb on - strand, within AO356_22750 at 5081.382 kb on + strand, within AO356_22750 at 5081.382 kb on + strand, within AO356_22750 at 5081.382 kb on + strand, within AO356_22750 at 5081.382 kb on + strand, within AO356_22750 at 5081.383 kb on - strand, within AO356_22750 at 5081.383 kb on - strand, within AO356_22750 at 5081.482 kb on - strand, within AO356_22750 at 5081.482 kb on - strand, within AO356_22750 at 5081.550 kb on + strand, within AO356_22750 at 5081.550 kb on + strand, within AO356_22750 at 5081.550 kb on + strand, within AO356_22750 at 5081.605 kb on - strand, within AO356_22750 at 5081.631 kb on + strand at 5081.631 kb on + strand at 5081.631 kb on + strand at 5081.631 kb on + strand at 5081.631 kb on + strand at 5081.632 kb on - strand at 5081.632 kb on - strand at 5081.632 kb on - strand at 5081.632 kb on - strand at 5081.632 kb on - strand at 5082.208 kb on - strand, within AO356_22755 at 5082.208 kb on - strand, within AO356_22755 at 5082.208 kb on - strand, within AO356_22755 at 5082.208 kb on - strand, within AO356_22755 at 5082.597 kb on + strand, within AO356_22755 at 5082.597 kb on + strand, within AO356_22755 at 5082.597 kb on + strand, within AO356_22755 at 5082.597 kb on + strand, within AO356_22755 at 5082.598 kb on - strand, within AO356_22755 at 5082.598 kb on - strand, within AO356_22755 at 5082.598 kb on - strand, within AO356_22755 at 5082.622 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.625 mM remove 5,080,400 + AO356_22745 0.40 -0.8 5,080,401 - AO356_22745 0.40 +0.4 5,080,401 - AO356_22745 0.40 +0.4 5,080,500 + AO356_22745 0.50 +0.5 5,080,500 + AO356_22745 0.50 -0.2 5,080,500 + AO356_22745 0.50 +1.0 5,080,750 - AO356_22745 0.73 -0.7 5,081,079 + +0.7 5,081,080 - -0.8 5,081,172 + +0.5 5,081,373 + AO356_22750 0.37 -2.3 5,081,374 - AO356_22750 0.38 -0.8 5,081,374 - AO356_22750 0.38 -0.7 5,081,382 + AO356_22750 0.39 +0.7 5,081,382 + AO356_22750 0.39 -1.0 5,081,382 + AO356_22750 0.39 -0.1 5,081,382 + AO356_22750 0.39 -0.5 5,081,383 - AO356_22750 0.39 -0.4 5,081,383 - AO356_22750 0.39 -0.7 5,081,482 - AO356_22750 0.60 -0.2 5,081,482 - AO356_22750 0.60 -0.2 5,081,550 + AO356_22750 0.74 -1.7 5,081,550 + AO356_22750 0.74 -1.4 5,081,550 + AO356_22750 0.74 +0.8 5,081,605 - AO356_22750 0.85 -0.0 5,081,631 + +1.0 5,081,631 + +0.6 5,081,631 + -0.4 5,081,631 + +0.2 5,081,631 + +1.0 5,081,632 - -0.3 5,081,632 - -0.5 5,081,632 - +0.9 5,081,632 - +0.2 5,081,632 - -0.5 5,082,208 - AO356_22755 0.53 +0.7 5,082,208 - AO356_22755 0.53 -0.7 5,082,208 - AO356_22755 0.53 +0.7 5,082,208 - AO356_22755 0.53 -0.5 5,082,597 + AO356_22755 0.89 +0.1 5,082,597 + AO356_22755 0.89 -0.4 5,082,597 + AO356_22755 0.89 +0.2 5,082,597 + AO356_22755 0.89 +0.6 5,082,598 - AO356_22755 0.89 -0.8 5,082,598 - AO356_22755 0.89 -0.3 5,082,598 - AO356_22755 0.89 -0.0 5,082,622 - +0.3
Or see this region's nucleotide sequence