Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_004852

Experiment: L-Malic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C)
1,067,464	+				+1.0
1,067,464	+				-0.7
1,067,465	-				+0.6
1,067,465	-				-0.3
1,067,465	-				-1.9
1,067,465	-				-0.3
1,067,465	-				-1.4
1,067,473	-				-1.3
1,067,473	-				+0.1
1,067,479	+				-1.4
1,067,479	+				-0.2
1,067,480	-				-1.6
1,067,480	-				-1.5
1,067,480	-				+1.4
1,067,480	-				-0.6
1,067,480	-				+0.2
1,067,480	-				-0.4
1,067,559	+				+1.4
1,067,559	+				-0.3
1,067,559	+				-0.1
1,067,559	+				-1.1
1,067,559	+				+0.6
1,067,559	+				-0.0
1,067,559	+				-0.6
1,067,560	-				-0.7
1,067,560	-				+1.4
1,067,560	-				-0.4
1,067,560	-				-0.7
1,067,560	-				+0.1
1,067,560	-				-0.0
1,067,560	-				+0.3
1,067,560	-				-0.5
1,067,560	-				-1.0
1,067,560	-				-2.3
1,067,560	-				+1.0
1,067,560	-				-0.4
1,067,560	-				+0.1
1,067,560	-				-0.1
1,067,619	+		ABIE53_004851	0.10	-0.7
1,067,620	-		ABIE53_004851	0.10	-0.3
1,067,620	-		ABIE53_004851	0.10	+0.0
1,067,620	-		ABIE53_004851	0.10	-3.0
1,068,008	-		ABIE53_004851	0.69	+0.5
1,068,099	+		ABIE53_004851	0.83	-2.0
1,068,099	+		ABIE53_004851	0.83	+0.4
1,068,099	+		ABIE53_004851	0.83	+0.4
1,068,099	+		ABIE53_004851	0.83	-1.4
1,068,100	-		ABIE53_004851	0.83	+0.6
1,068,100	-		ABIE53_004851	0.83	+0.6
1,068,100	-		ABIE53_004851	0.83	-0.2
1,068,100	-		ABIE53_004851	0.83	-1.0
1,068,100	-		ABIE53_004851	0.83	+0.1
1,068,103	-		ABIE53_004851	0.84	+0.7
1,068,103	-		ABIE53_004851	0.84	-0.4
1,068,135	+		ABIE53_004851	0.89	+0.7
1,068,135	+		ABIE53_004851	0.89	-1.6
1,068,135	+		ABIE53_004851	0.89	+0.8
1,068,135	+		ABIE53_004851	0.89	+2.4
1,068,135	+		ABIE53_004851	0.89	+1.5
1,068,135	+		ABIE53_004851	0.89	-0.3
1,068,135	+		ABIE53_004851	0.89	-0.1
1,068,135	+		ABIE53_004851	0.89	-0.9
1,068,135	+		ABIE53_004851	0.89	-2.2
1,068,135	+		ABIE53_004851	0.89	-0.1
1,068,135	+		ABIE53_004851	0.89	-0.6
1,068,136	-		ABIE53_004851	0.89	+0.2
1,068,136	-		ABIE53_004851	0.89	-0.6
1,068,136	-		ABIE53_004851	0.89	-0.2
1,068,136	-		ABIE53_004851	0.89	-1.4
1,068,136	-		ABIE53_004851	0.89	+1.4
1,068,168	+				-0.4
1,068,184	+				+0.8
1,068,185	-				+1.4
1,068,185	-				-0.0
1,068,196	+				-1.0
1,068,196	+				-1.2
1,068,196	+				+2.0
1,068,289	+				+1.1
1,068,290	-				+0.9
1,068,295	+				-1.0
1,068,295	+				-2.6
1,068,295	+				-0.1
1,068,295	+				+0.4
1,068,295	+				+0.6
1,068,296	-				-1.4
1,068,296	-				+0.8
1,068,296	-				+0.4
1,068,296	-				+0.3
1,068,296	-				-1.0
1,068,334	+				-1.4
1,069,243	-		ABIE53_004852	0.35	+0.4
1,069,398	+		ABIE53_004852	0.40	-2.1
1,069,398	+		ABIE53_004852	0.40	-1.0
1,069,521	+		ABIE53_004852	0.45	-1.2
1,069,521	+		ABIE53_004852	0.45	+0.4
1,069,521	+		ABIE53_004852	0.45	-0.4
1,069,522	-		ABIE53_004852	0.45	-1.0
1,069,545	+		ABIE53_004852	0.46	+1.4
1,069,593	+		ABIE53_004852	0.47	-1.8
1,069,593	+		ABIE53_004852	0.47	-0.3
1,069,593	+		ABIE53_004852	0.47	-1.4
1,069,593	+		ABIE53_004852	0.47	+1.4
1,069,594	-		ABIE53_004852	0.47	-0.2
1,069,594	-		ABIE53_004852	0.47	-0.8
1,069,594	-		ABIE53_004852	0.47	-1.4
1,069,594	-		ABIE53_004852	0.47	+2.4
1,069,594	-		ABIE53_004852	0.47	-0.4
1,069,594	-		ABIE53_004852	0.47	-1.4
1,069,668	+		ABIE53_004852	0.50	-1.0
1,069,668	+		ABIE53_004852	0.50	-1.4
1,069,668	+		ABIE53_004852	0.50	-0.4
1,069,668	+		ABIE53_004852	0.50	-1.2
1,069,668	+		ABIE53_004852	0.50	-0.9
1,069,668	+		ABIE53_004852	0.50	+0.2
1,069,668	+		ABIE53_004852	0.50	-1.4
1,069,668	+		ABIE53_004852	0.50	-0.4
1,069,668	+		ABIE53_004852	0.50	+0.7
1,069,668	+		ABIE53_004852	0.50	-1.5
1,069,669	-		ABIE53_004852	0.50	-0.1
1,069,740	+		ABIE53_004852	0.53	+0.3
1,069,827	+		ABIE53_004852	0.56	-1.6
1,069,827	+		ABIE53_004852	0.56	-1.2
1,069,828	-		ABIE53_004852	0.56	-0.7
1,069,828	-		ABIE53_004852	0.56	-2.2
1,069,962	+		ABIE53_004852	0.61	-0.8
1,069,962	+		ABIE53_004852	0.61	-1.4
1,069,962	+		ABIE53_004852	0.61	-0.8
1,069,962	+		ABIE53_004852	0.61	-2.0
1,069,962	+		ABIE53_004852	0.61	+2.0
1,069,962	+		ABIE53_004852	0.61	-1.2
1,069,962	+		ABIE53_004852	0.61	-1.2
1,069,962	+		ABIE53_004852	0.61	-2.6
1,069,962	+		ABIE53_004852	0.61	-1.7
1,069,962	+		ABIE53_004852	0.61	-2.5
1,069,962	+		ABIE53_004852	0.61	-1.9
1,069,962	+		ABIE53_004852	0.61	-0.6
1,069,962	+		ABIE53_004852	0.61	-3.0
1,069,962	+		ABIE53_004852	0.61	+2.4
1,069,962	+		ABIE53_004852	0.61	-1.4
1,069,962	+		ABIE53_004852	0.61	-1.3
1,069,962	+		ABIE53_004852	0.61	-1.0
1,069,963	-		ABIE53_004852	0.61	-0.8
1,069,963	-		ABIE53_004852	0.61	-2.6
1,069,963	-		ABIE53_004852	0.61	+0.6
1,069,963	-		ABIE53_004852	0.61	-0.6
1,069,963	-		ABIE53_004852	0.61	+0.4
1,069,963	-		ABIE53_004852	0.61	-1.3
1,069,963	-		ABIE53_004852	0.61	-4.2
1,069,963	-		ABIE53_004852	0.61	-2.9
1,069,963	-		ABIE53_004852	0.61	+0.0
1,069,963	-		ABIE53_004852	0.61	-0.4
1,069,963	-		ABIE53_004852	0.61	-1.9
1,069,963	-		ABIE53_004852	0.61	-2.2
1,069,963	-		ABIE53_004852	0.61	-0.5
1,069,963	-		ABIE53_004852	0.61	-1.4
1,069,963	-		ABIE53_004852	0.61	-1.0
1,069,963	-		ABIE53_004852	0.61	-0.2
1,070,169	+		ABIE53_004852	0.68	-1.2
1,070,169	+		ABIE53_004852	0.68	-2.3
1,070,170	-		ABIE53_004852	0.68	-2.8
1,070,170	-		ABIE53_004852	0.68	-0.2
1,070,226	+		ABIE53_004852	0.70	-1.4
1,070,226	+		ABIE53_004852	0.70	-1.2
1,070,227	-		ABIE53_004852	0.70	+0.4
1,070,422	+		ABIE53_004852	0.77	-2.1
1,070,422	+		ABIE53_004852	0.77	-1.2
1,070,423	-		ABIE53_004852	0.78	-0.6
1,070,589	-		ABIE53_004852	0.84	-0.2
1,070,610	+		ABIE53_004852	0.84	-1.3
1,070,610	+		ABIE53_004852	0.84	-2.2
1,070,610	+		ABIE53_004852	0.84	+1.4
1,070,611	-		ABIE53_004852	0.84	-1.0
1,070,611	-		ABIE53_004852	0.84	+0.4
1,070,611	-		ABIE53_004852	0.84	+1.4
1,070,612	+		ABIE53_004852	0.84	-1.2
1,070,612	+		ABIE53_004852	0.84	-1.8
1,070,613	-		ABIE53_004852	0.84	-1.5
1,070,622	+		ABIE53_004852	0.85	-2.4
1,070,623	-		ABIE53_004852	0.85	-1.9
1,070,652	+		ABIE53_004852	0.86	-1.7
1,070,653	-		ABIE53_004852	0.86	-1.0
1,070,653	-		ABIE53_004852	0.86	-0.2
1,070,654	+		ABIE53_004852	0.86	-1.0
1,070,654	+		ABIE53_004852	0.86	-1.4
1,070,654	+		ABIE53_004852	0.86	-1.2
1,070,654	+		ABIE53_004852	0.86	+1.4
1,070,654	+		ABIE53_004852	0.86	-2.6
1,070,654	+		ABIE53_004852	0.86	-0.8
1,070,655	-		ABIE53_004852	0.86	-1.0
1,070,655	-		ABIE53_004852	0.86	-0.2
1,070,691	+		ABIE53_004852	0.87	-1.8
1,070,692	-		ABIE53_004852	0.87	+0.1
1,070,692	-		ABIE53_004852	0.87	-0.0
1,070,914	+				+0.4
1,070,914	+				-2.4
1,070,914	+				-1.8
1,070,914	+				-1.4
1,071,060	+				+0.5
1,071,060	+				+0.4
1,071,060	+				+2.0
1,071,131	-				-0.3
1,071,158	-				+0.7
1,071,158	-				+0.4
1,071,181	+				+0.1
1,071,181	+				-0.3
1,071,181	+				+0.1
1,071,182	-				+0.4
1,071,182	-				-0.4
1,071,205	+				+0.4
1,071,205	+				-2.3
1,071,206	-				-0.7
1,071,206	-				-0.2
1,071,263	+				+1.0
1,071,263	+				-0.2
1,071,263	+				+0.4
1,071,264	-				-1.4
1,071,264	-				+0.0
1,071,264	-				+0.0
1,071,264	-				+0.7
1,071,264	-				+0.2
1,071,328	+				+0.8
1,071,328	+				+0.1
1,071,328	+				-0.8
1,071,329	-		ABIE53_004853	0.10	+0.2
1,071,329	-		ABIE53_004853	0.10	+0.7
1,071,329	-		ABIE53_004853	0.10	-0.6
1,071,329	-		ABIE53_004853	0.10	+0.3
1,071,395	+		ABIE53_004853	0.15	-0.2
1,071,396	-		ABIE53_004853	0.15	+0.6
1,071,396	-		ABIE53_004853	0.15	+0.6
1,071,489	+		ABIE53_004853	0.22	-0.6
1,071,489	+		ABIE53_004853	0.22	-0.1
1,071,489	+		ABIE53_004853	0.22	-0.1
1,071,490	-		ABIE53_004853	0.22	+2.2
1,071,523	-		ABIE53_004853	0.24	-2.5
1,071,523	-		ABIE53_004853	0.24	+1.0
1,071,523	-		ABIE53_004853	0.24	+1.4
1,071,655	+		ABIE53_004853	0.34	-0.4
1,071,655	+		ABIE53_004853	0.34	+0.1
1,071,655	+		ABIE53_004853	0.34	+1.4
1,071,656	-		ABIE53_004853	0.34	-0.6
1,071,824	+		ABIE53_004853	0.47	+1.0
1,071,824	+		ABIE53_004853	0.47	-3.0
1,071,824	+		ABIE53_004853	0.47	-1.0
1,071,824	+		ABIE53_004853	0.47	-0.4
1,071,825	-		ABIE53_004853	0.47	-0.7
1,071,867	+		ABIE53_004853	0.50	-0.3
1,071,867	+		ABIE53_004853	0.50	-0.4
1,071,867	+		ABIE53_004853	0.50	-2.1
1,071,867	+		ABIE53_004853	0.50	+1.6
1,071,867	+		ABIE53_004853	0.50	-1.0
1,071,867	+		ABIE53_004853	0.50	-0.5
1,071,867	+		ABIE53_004853	0.50	-0.1
1,071,867	+		ABIE53_004853	0.50	+0.0
1,071,867	+		ABIE53_004853	0.50	-0.0
1,071,867	+		ABIE53_004853	0.50	-0.5
1,071,867	+		ABIE53_004853	0.50	+0.4
1,071,867	+		ABIE53_004853	0.50	-1.0
1,071,868	-		ABIE53_004853	0.50	+0.3
1,071,868	-		ABIE53_004853	0.50	+1.4
1,071,868	-		ABIE53_004853	0.50	-0.6
1,071,868	-		ABIE53_004853	0.50	-1.1
1,071,868	-		ABIE53_004853	0.50	-0.1
1,071,868	-		ABIE53_004853	0.50	+0.1
1,071,868	-		ABIE53_004853	0.50	+0.9