Experiment: Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21182 and SM_b21183 are separated by 189 nucleotides SM_b21183 and SM_b21184 are separated by 104 nucleotides
SM_b21182: SM_b21182 - hypothetical protein, at 929,179 to 930,363
_b21182
SM_b21183: SM_b21183 - molecular chaperone HtpG, at 930,553 to 932,442
_b21183
SM_b21184: SM_b21184 - acetate kinase, at 932,547 to 933,725
_b21184
Position (kb) 930
931
932
933 Strain fitness (log2 ratio) -1
0
1
2 at 929.554 kb on + strand, within SM_b21182 at 929.554 kb on + strand, within SM_b21182 at 929.554 kb on + strand, within SM_b21182 at 929.555 kb on - strand, within SM_b21182 at 929.591 kb on - strand, within SM_b21182 at 929.591 kb on - strand, within SM_b21182 at 929.614 kb on + strand, within SM_b21182 at 929.614 kb on + strand, within SM_b21182 at 929.614 kb on + strand, within SM_b21182 at 929.700 kb on + strand, within SM_b21182 at 929.701 kb on - strand, within SM_b21182 at 929.887 kb on - strand, within SM_b21182 at 930.083 kb on - strand, within SM_b21182 at 930.159 kb on - strand, within SM_b21182 at 930.312 kb on + strand at 930.367 kb on - strand at 930.367 kb on - strand at 930.382 kb on + strand at 930.382 kb on + strand at 930.383 kb on - strand at 930.383 kb on - strand at 930.384 kb on + strand at 930.385 kb on - strand at 930.385 kb on - strand at 930.546 kb on + strand at 930.546 kb on + strand at 930.546 kb on + strand at 931.158 kb on - strand, within SM_b21183 at 931.160 kb on + strand, within SM_b21183 at 931.160 kb on + strand, within SM_b21183 at 931.160 kb on + strand, within SM_b21183 at 931.161 kb on - strand, within SM_b21183 at 931.161 kb on - strand, within SM_b21183 at 931.161 kb on - strand, within SM_b21183 at 931.161 kb on - strand, within SM_b21183 at 931.161 kb on - strand, within SM_b21183 at 931.161 kb on - strand, within SM_b21183 at 931.196 kb on + strand, within SM_b21183 at 931.197 kb on - strand, within SM_b21183 at 931.197 kb on - strand, within SM_b21183 at 931.286 kb on + strand, within SM_b21183 at 931.286 kb on + strand, within SM_b21183 at 931.287 kb on - strand, within SM_b21183 at 931.404 kb on + strand, within SM_b21183 at 931.496 kb on + strand, within SM_b21183 at 931.544 kb on + strand, within SM_b21183 at 931.544 kb on + strand, within SM_b21183 at 931.544 kb on + strand, within SM_b21183 at 931.544 kb on + strand, within SM_b21183 at 931.545 kb on - strand, within SM_b21183 at 931.620 kb on + strand, within SM_b21183 at 931.652 kb on - strand, within SM_b21183 at 931.652 kb on - strand, within SM_b21183 at 931.674 kb on - strand, within SM_b21183 at 931.705 kb on - strand, within SM_b21183 at 931.706 kb on + strand at 931.707 kb on - strand, within SM_b21183 at 931.896 kb on + strand, within SM_b21183 at 931.897 kb on - strand, within SM_b21183 at 931.897 kb on - strand, within SM_b21183 at 931.949 kb on + strand, within SM_b21183 at 932.045 kb on + strand, within SM_b21183 at 932.046 kb on - strand, within SM_b21183 at 932.046 kb on - strand, within SM_b21183 at 932.289 kb on - strand at 932.357 kb on + strand at 932.842 kb on - strand, within SM_b21184 at 933.030 kb on + strand, within SM_b21184 at 933.031 kb on - strand, within SM_b21184 at 933.051 kb on + strand, within SM_b21184 at 933.051 kb on + strand, within SM_b21184 at 933.051 kb on + strand, within SM_b21184 at 933.052 kb on - strand, within SM_b21184 at 933.099 kb on + strand, within SM_b21184 at 933.099 kb on + strand, within SM_b21184 at 933.099 kb on + strand, within SM_b21184 at 933.100 kb on - strand, within SM_b21184 at 933.100 kb on - strand, within SM_b21184 at 933.100 kb on - strand, within SM_b21184 at 933.100 kb on - strand, within SM_b21184 at 933.101 kb on + strand, within SM_b21184 at 933.101 kb on + strand, within SM_b21184 at 933.314 kb on + strand, within SM_b21184 at 933.314 kb on + strand, within SM_b21184 at 933.314 kb on + strand, within SM_b21184
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.5 mM remove 929,554 + SM_b21182 0.32 +0.0 929,554 + SM_b21182 0.32 -0.0 929,554 + SM_b21182 0.32 -0.9 929,555 - SM_b21182 0.32 +0.1 929,591 - SM_b21182 0.35 -1.1 929,591 - SM_b21182 0.35 -0.4 929,614 + SM_b21182 0.37 -1.0 929,614 + SM_b21182 0.37 -1.4 929,614 + SM_b21182 0.37 -0.2 929,700 + SM_b21182 0.44 -0.3 929,701 - SM_b21182 0.44 -0.9 929,887 - SM_b21182 0.60 +0.1 930,083 - SM_b21182 0.76 -0.2 930,159 - SM_b21182 0.83 -0.2 930,312 + -0.4 930,367 - -0.0 930,367 - -0.1 930,382 + +0.1 930,382 + -0.3 930,383 - -0.4 930,383 - -0.4 930,384 + -0.9 930,385 - -0.8 930,385 - +0.1 930,546 + +0.2 930,546 + +1.1 930,546 + +0.7 931,158 - SM_b21183 0.32 +1.5 931,160 + SM_b21183 0.32 +0.7 931,160 + SM_b21183 0.32 +0.5 931,160 + SM_b21183 0.32 +0.8 931,161 - SM_b21183 0.32 +0.9 931,161 - SM_b21183 0.32 +0.6 931,161 - SM_b21183 0.32 +1.1 931,161 - SM_b21183 0.32 +0.9 931,161 - SM_b21183 0.32 +0.5 931,161 - SM_b21183 0.32 -0.1 931,196 + SM_b21183 0.34 +0.9 931,197 - SM_b21183 0.34 -0.1 931,197 - SM_b21183 0.34 +0.7 931,286 + SM_b21183 0.39 +0.0 931,286 + SM_b21183 0.39 +0.8 931,287 - SM_b21183 0.39 -0.1 931,404 + SM_b21183 0.45 +0.3 931,496 + SM_b21183 0.50 +0.3 931,544 + SM_b21183 0.52 +0.2 931,544 + SM_b21183 0.52 +0.3 931,544 + SM_b21183 0.52 +0.5 931,544 + SM_b21183 0.52 +0.5 931,545 - SM_b21183 0.52 +0.2 931,620 + SM_b21183 0.56 -0.6 931,652 - SM_b21183 0.58 +1.1 931,652 - SM_b21183 0.58 -0.1 931,674 - SM_b21183 0.59 +0.4 931,705 - SM_b21183 0.61 +0.4 931,706 + +0.1 931,707 - SM_b21183 0.61 +2.7 931,896 + SM_b21183 0.71 +0.4 931,897 - SM_b21183 0.71 +0.6 931,897 - SM_b21183 0.71 +0.2 931,949 + SM_b21183 0.74 +0.5 932,045 + SM_b21183 0.79 +0.2 932,046 - SM_b21183 0.79 +0.3 932,046 - SM_b21183 0.79 -0.2 932,289 - +1.2 932,357 + +0.9 932,842 - SM_b21184 0.25 -1.2 933,030 + SM_b21184 0.41 -0.4 933,031 - SM_b21184 0.41 +0.0 933,051 + SM_b21184 0.43 -0.6 933,051 + SM_b21184 0.43 -0.0 933,051 + SM_b21184 0.43 -1.4 933,052 - SM_b21184 0.43 -0.7 933,099 + SM_b21184 0.47 -1.0 933,099 + SM_b21184 0.47 +0.2 933,099 + SM_b21184 0.47 +0.1 933,100 - SM_b21184 0.47 +0.1 933,100 - SM_b21184 0.47 -0.2 933,100 - SM_b21184 0.47 +0.1 933,100 - SM_b21184 0.47 -0.5 933,101 + SM_b21184 0.47 +0.1 933,101 + SM_b21184 0.47 +0.8 933,314 + SM_b21184 0.65 -1.7 933,314 + SM_b21184 0.65 +0.1 933,314 + SM_b21184 0.65 -0.7
Or see this region's nucleotide sequence