Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS03140 and RR42_RS03145 are separated by 94 nucleotides
RR42_RS03140: RR42_RS03140 - molybdenum cofactor biosynthesis protein MoaC, at 694,065 to 694,547
_RS03140
RR42_RS03145: RR42_RS03145 - peptidase M48, at 694,642 to 696,450
_RS03145
Position (kb) 694
695 Strain fitness (log2 ratio) -2
-1
0
1
2 at 693.084 kb on - strand at 693.101 kb on - strand at 693.135 kb on + strand at 693.204 kb on - strand at 693.204 kb on - strand at 693.204 kb on - strand at 693.286 kb on + strand at 693.286 kb on + strand at 693.286 kb on + strand at 693.287 kb on - strand at 693.287 kb on - strand at 693.287 kb on - strand at 693.289 kb on - strand at 693.366 kb on - strand at 693.378 kb on + strand at 693.390 kb on - strand at 693.397 kb on + strand at 693.397 kb on + strand at 693.412 kb on + strand at 693.412 kb on + strand at 693.413 kb on - strand at 693.465 kb on + strand at 693.466 kb on - strand at 693.466 kb on - strand at 693.529 kb on + strand at 693.529 kb on + strand at 693.529 kb on + strand at 693.530 kb on - strand at 693.530 kb on - strand at 693.530 kb on - strand at 693.530 kb on - strand at 693.531 kb on + strand at 693.531 kb on + strand at 693.531 kb on + strand at 693.531 kb on + strand at 693.532 kb on - strand at 693.532 kb on - strand at 693.532 kb on - strand at 693.532 kb on - strand at 693.532 kb on - strand at 693.532 kb on - strand at 693.532 kb on - strand at 693.532 kb on - strand at 693.534 kb on - strand at 693.534 kb on - strand at 693.534 kb on - strand at 693.534 kb on - strand at 693.534 kb on - strand at 693.543 kb on + strand at 693.544 kb on - strand at 693.549 kb on + strand at 693.549 kb on + strand at 693.549 kb on + strand at 693.549 kb on + strand at 693.550 kb on - strand at 693.615 kb on - strand at 693.661 kb on - strand at 693.684 kb on + strand at 693.685 kb on - strand at 693.723 kb on - strand at 693.799 kb on + strand at 693.799 kb on + strand at 693.800 kb on - strand at 693.800 kb on - strand at 693.800 kb on - strand at 693.933 kb on + strand at 693.933 kb on + strand at 693.933 kb on + strand at 693.933 kb on + strand at 693.933 kb on + strand at 693.933 kb on + strand at 693.933 kb on + strand at 693.934 kb on - strand at 693.934 kb on - strand at 693.934 kb on - strand at 693.934 kb on - strand at 693.934 kb on - strand at 693.936 kb on + strand at 693.937 kb on - strand at 693.965 kb on + strand at 694.028 kb on - strand at 694.066 kb on + strand at 694.066 kb on + strand at 694.067 kb on - strand at 694.168 kb on + strand, within RR42_RS03140 at 694.168 kb on + strand, within RR42_RS03140 at 694.169 kb on - strand, within RR42_RS03140 at 694.169 kb on - strand, within RR42_RS03140 at 694.169 kb on - strand, within RR42_RS03140 at 694.285 kb on + strand, within RR42_RS03140 at 694.324 kb on - strand, within RR42_RS03140 at 694.383 kb on + strand, within RR42_RS03140 at 694.383 kb on + strand, within RR42_RS03140 at 694.383 kb on + strand, within RR42_RS03140 at 694.505 kb on + strand at 694.505 kb on + strand at 694.505 kb on + strand at 694.506 kb on - strand at 694.667 kb on - strand at 694.667 kb on - strand at 694.667 kb on - strand at 694.671 kb on + strand at 694.671 kb on + strand at 694.671 kb on + strand at 694.671 kb on + strand at 694.672 kb on - strand at 694.672 kb on - strand at 694.672 kb on - strand at 694.855 kb on - strand, within RR42_RS03145 at 694.855 kb on - strand, within RR42_RS03145 at 694.912 kb on + strand, within RR42_RS03145 at 694.912 kb on + strand, within RR42_RS03145 at 694.913 kb on - strand, within RR42_RS03145 at 694.913 kb on - strand, within RR42_RS03145 at 694.913 kb on - strand, within RR42_RS03145 at 695.104 kb on + strand, within RR42_RS03145 at 695.104 kb on + strand, within RR42_RS03145 at 695.105 kb on - strand, within RR42_RS03145 at 695.105 kb on - strand, within RR42_RS03145 at 695.105 kb on - strand, within RR42_RS03145 at 695.105 kb on - strand, within RR42_RS03145 at 695.131 kb on + strand, within RR42_RS03145 at 695.132 kb on - strand, within RR42_RS03145 at 695.279 kb on - strand, within RR42_RS03145 at 695.280 kb on + strand, within RR42_RS03145 at 695.281 kb on - strand, within RR42_RS03145 at 695.377 kb on - strand, within RR42_RS03145 at 695.377 kb on - strand, within RR42_RS03145
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 693,084 - +0.7 693,101 - +0.7 693,135 + +0.1 693,204 - -0.7 693,204 - -0.7 693,204 - -1.8 693,286 + +0.1 693,286 + -0.4 693,286 + +2.7 693,287 - +0.1 693,287 - +0.3 693,287 - -1.5 693,289 - +0.0 693,366 - +0.3 693,378 + +1.7 693,390 - +0.3 693,397 + +0.1 693,397 + -0.5 693,412 + -1.6 693,412 + +0.7 693,413 - -0.1 693,465 + +0.3 693,466 - -0.0 693,466 - +1.1 693,529 + +2.1 693,529 + -0.6 693,529 + +1.4 693,530 - +0.9 693,530 - -1.3 693,530 - +0.0 693,530 - +0.9 693,531 + +0.1 693,531 + +0.7 693,531 + -0.6 693,531 + +0.1 693,532 - -0.4 693,532 - -0.6 693,532 - -0.2 693,532 - +0.5 693,532 - -0.1 693,532 - -0.2 693,532 - +1.3 693,532 - -0.4 693,534 - -0.9 693,534 - -0.7 693,534 - +2.1 693,534 - -1.1 693,534 - -0.3 693,543 + +0.1 693,544 - +0.4 693,549 + +0.8 693,549 + +0.4 693,549 + +2.7 693,549 + -0.3 693,550 - +0.4 693,615 - -0.9 693,661 - -0.9 693,684 + +1.1 693,685 - +2.4 693,723 - +0.1 693,799 + +0.6 693,799 + +0.5 693,800 - -0.1 693,800 - +1.3 693,800 - +0.3 693,933 + +0.8 693,933 + -1.4 693,933 + -0.5 693,933 + +0.8 693,933 + -0.1 693,933 + +1.0 693,933 + -0.2 693,934 - +0.8 693,934 - +1.1 693,934 - +1.9 693,934 - -0.5 693,934 - -0.2 693,936 + +0.2 693,937 - -1.3 693,965 + -0.0 694,028 - -0.2 694,066 + +1.0 694,066 + -0.3 694,067 - -0.0 694,168 + RR42_RS03140 0.21 -0.6 694,168 + RR42_RS03140 0.21 -0.2 694,169 - RR42_RS03140 0.22 -1.1 694,169 - RR42_RS03140 0.22 -0.3 694,169 - RR42_RS03140 0.22 -0.2 694,285 + RR42_RS03140 0.46 -0.2 694,324 - RR42_RS03140 0.54 +0.2 694,383 + RR42_RS03140 0.66 +0.8 694,383 + RR42_RS03140 0.66 -0.9 694,383 + RR42_RS03140 0.66 -0.8 694,505 + +0.3 694,505 + -0.3 694,505 + -0.1 694,506 - +0.6 694,667 - -0.0 694,667 - +1.1 694,667 - -0.1 694,671 + -0.3 694,671 + +0.1 694,671 + +0.3 694,671 + -0.6 694,672 - -1.4 694,672 - +0.2 694,672 - -1.1 694,855 - RR42_RS03145 0.12 -1.1 694,855 - RR42_RS03145 0.12 -1.6 694,912 + RR42_RS03145 0.15 +0.0 694,912 + RR42_RS03145 0.15 -0.6 694,913 - RR42_RS03145 0.15 +0.2 694,913 - RR42_RS03145 0.15 -1.9 694,913 - RR42_RS03145 0.15 +1.0 695,104 + RR42_RS03145 0.26 +0.1 695,104 + RR42_RS03145 0.26 +0.4 695,105 - RR42_RS03145 0.26 +0.2 695,105 - RR42_RS03145 0.26 +1.0 695,105 - RR42_RS03145 0.26 +1.1 695,105 - RR42_RS03145 0.26 +1.0 695,131 + RR42_RS03145 0.27 -0.9 695,132 - RR42_RS03145 0.27 -0.4 695,279 - RR42_RS03145 0.35 +0.6 695,280 + RR42_RS03145 0.35 -0.3 695,281 - RR42_RS03145 0.35 -1.1 695,377 - RR42_RS03145 0.41 +0.7 695,377 - RR42_RS03145 0.41 -0.1
Or see this region's nucleotide sequence