Experiment: KB with Phloretin 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3720 and Psyr_3721 are separated by 638 nucleotides Psyr_3721 and Psyr_3722 are separated by 260 nucleotides
Psyr_3720: Psyr_3720 - Filamentation induced by cAMP protein Fic, at 4,408,636 to 4,409,241
_3720
Psyr_3721: Psyr_3721 - Ribonucleoside-diphosphate reductase, at 4,409,880 to 4,411,127
_3721
Psyr_3722: Psyr_3722 - Amino acid adenylation, at 4,411,388 to 4,431,418
_3722
Position (kb) 4409
4410
4411
4412 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4408.880 kb on + strand, within Psyr_3720 at 4408.880 kb on + strand, within Psyr_3720 at 4408.880 kb on + strand, within Psyr_3720 at 4408.997 kb on + strand, within Psyr_3720 at 4408.997 kb on + strand, within Psyr_3720 at 4408.998 kb on - strand, within Psyr_3720 at 4409.076 kb on - strand, within Psyr_3720 at 4409.157 kb on + strand, within Psyr_3720 at 4409.157 kb on + strand, within Psyr_3720 at 4409.158 kb on - strand, within Psyr_3720 at 4409.158 kb on - strand, within Psyr_3720 at 4409.161 kb on + strand, within Psyr_3720 at 4409.162 kb on - strand, within Psyr_3720 at 4409.162 kb on - strand, within Psyr_3720 at 4409.162 kb on - strand, within Psyr_3720 at 4409.162 kb on - strand, within Psyr_3720 at 4409.162 kb on - strand, within Psyr_3720 at 4409.179 kb on + strand, within Psyr_3720 at 4409.180 kb on - strand, within Psyr_3720 at 4409.190 kb on + strand at 4409.192 kb on + strand at 4409.192 kb on + strand at 4409.192 kb on + strand at 4409.193 kb on - strand at 4409.193 kb on - strand at 4409.193 kb on - strand at 4409.193 kb on - strand at 4409.193 kb on - strand at 4409.223 kb on + strand at 4409.223 kb on + strand at 4409.224 kb on - strand at 4409.224 kb on - strand at 4409.224 kb on - strand at 4409.264 kb on - strand at 4409.393 kb on + strand at 4409.393 kb on + strand at 4409.393 kb on + strand at 4409.393 kb on + strand at 4409.393 kb on + strand at 4409.393 kb on + strand at 4409.394 kb on - strand at 4409.394 kb on - strand at 4409.407 kb on + strand at 4409.435 kb on + strand at 4409.435 kb on + strand at 4409.435 kb on + strand at 4409.435 kb on + strand at 4409.435 kb on + strand at 4409.435 kb on + strand at 4409.437 kb on + strand at 4409.466 kb on + strand at 4409.466 kb on + strand at 4409.470 kb on + strand at 4409.502 kb on + strand at 4409.597 kb on + strand at 4409.597 kb on + strand at 4409.597 kb on + strand at 4411.150 kb on + strand at 4411.151 kb on - strand at 4411.390 kb on - strand at 4411.390 kb on - strand at 4411.438 kb on + strand at 4411.514 kb on - strand at 4411.514 kb on - strand at 4411.599 kb on - strand at 4411.675 kb on - strand at 4411.697 kb on + strand at 4411.697 kb on + strand at 4411.697 kb on + strand at 4411.697 kb on + strand at 4411.697 kb on + strand at 4411.697 kb on + strand at 4411.698 kb on - strand at 4411.698 kb on - strand at 4411.698 kb on - strand at 4411.698 kb on - strand at 4411.698 kb on - strand at 4411.699 kb on + strand at 4411.700 kb on - strand at 4411.700 kb on - strand at 4411.700 kb on - strand at 4411.700 kb on - strand at 4411.729 kb on + strand at 4411.729 kb on + strand at 4411.729 kb on + strand at 4411.729 kb on + strand at 4411.730 kb on - strand at 4411.730 kb on - strand at 4411.730 kb on - strand at 4411.730 kb on - strand at 4411.730 kb on - strand at 4411.731 kb on + strand at 4411.731 kb on + strand at 4411.732 kb on - strand at 4411.732 kb on - strand at 4411.732 kb on - strand at 4411.790 kb on + strand at 4411.790 kb on + strand at 4411.790 kb on + strand at 4411.790 kb on + strand at 4411.791 kb on - strand at 4411.791 kb on - strand at 4411.791 kb on - strand at 4411.791 kb on - strand at 4411.791 kb on - strand at 4411.791 kb on - strand at 4411.929 kb on - strand at 4411.929 kb on - strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.024 kb on + strand at 4412.025 kb on - strand at 4412.025 kb on - strand at 4412.025 kb on - strand at 4412.025 kb on - strand at 4412.025 kb on - strand at 4412.025 kb on - strand at 4412.025 kb on - strand at 4412.047 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Phloretin 250 ug/ml remove 4,408,880 + Psyr_3720 0.40 -1.8 4,408,880 + Psyr_3720 0.40 -1.0 4,408,880 + Psyr_3720 0.40 -1.9 4,408,997 + Psyr_3720 0.60 -1.3 4,408,997 + Psyr_3720 0.60 -1.0 4,408,998 - Psyr_3720 0.60 +0.6 4,409,076 - Psyr_3720 0.73 -1.0 4,409,157 + Psyr_3720 0.86 -0.4 4,409,157 + Psyr_3720 0.86 -0.0 4,409,158 - Psyr_3720 0.86 -1.3 4,409,158 - Psyr_3720 0.86 +0.3 4,409,161 + Psyr_3720 0.87 -0.4 4,409,162 - Psyr_3720 0.87 -1.6 4,409,162 - Psyr_3720 0.87 -1.2 4,409,162 - Psyr_3720 0.87 -1.3 4,409,162 - Psyr_3720 0.87 -1.3 4,409,162 - Psyr_3720 0.87 -0.1 4,409,179 + Psyr_3720 0.90 -1.2 4,409,180 - Psyr_3720 0.90 -2.9 4,409,190 + -0.4 4,409,192 + -0.8 4,409,192 + +0.2 4,409,192 + -0.1 4,409,193 - -0.4 4,409,193 - -0.3 4,409,193 - -1.5 4,409,193 - -0.4 4,409,193 - -1.0 4,409,223 + -1.0 4,409,223 + -0.4 4,409,224 - -0.4 4,409,224 - -0.0 4,409,224 - -1.4 4,409,264 - -1.0 4,409,393 + -0.2 4,409,393 + -0.8 4,409,393 + -0.9 4,409,393 + -0.6 4,409,393 + -1.8 4,409,393 + +0.7 4,409,394 - +0.6 4,409,394 - -0.4 4,409,407 + -0.7 4,409,435 + +0.7 4,409,435 + -0.0 4,409,435 + +1.1 4,409,435 + +0.3 4,409,435 + -1.4 4,409,435 + +0.3 4,409,437 + +0.0 4,409,466 + -0.0 4,409,466 + -0.1 4,409,470 + +0.1 4,409,502 + -0.7 4,409,597 + -0.3 4,409,597 + -0.3 4,409,597 + -0.6 4,411,150 + +2.6 4,411,151 - -1.4 4,411,390 - -0.0 4,411,390 - -0.4 4,411,438 + -0.1 4,411,514 - -0.9 4,411,514 - +0.9 4,411,599 - +1.0 4,411,675 - +1.2 4,411,697 + +0.2 4,411,697 + -2.4 4,411,697 + +1.3 4,411,697 + +0.5 4,411,697 + +0.6 4,411,697 + -1.0 4,411,698 - +1.2 4,411,698 - -0.1 4,411,698 - +0.0 4,411,698 - +0.8 4,411,698 - -1.0 4,411,699 + +1.1 4,411,700 - +0.8 4,411,700 - +0.1 4,411,700 - +1.0 4,411,700 - +0.6 4,411,729 + -1.4 4,411,729 + -1.0 4,411,729 + -0.4 4,411,729 + -1.4 4,411,730 - -0.2 4,411,730 - -1.6 4,411,730 - +0.6 4,411,730 - +0.0 4,411,730 - -0.0 4,411,731 + -0.2 4,411,731 + -1.0 4,411,732 - -0.7 4,411,732 - -0.3 4,411,732 - -1.0 4,411,790 + -1.2 4,411,790 + +2.1 4,411,790 + +0.1 4,411,790 + +0.6 4,411,791 - +0.2 4,411,791 - -0.0 4,411,791 - -0.5 4,411,791 - +2.1 4,411,791 - -2.0 4,411,791 - +0.7 4,411,929 - +0.4 4,411,929 - +1.2 4,412,024 + -0.0 4,412,024 + +0.2 4,412,024 + +2.1 4,412,024 + +0.3 4,412,024 + -0.1 4,412,024 + +0.9 4,412,024 + +1.9 4,412,024 + -2.8 4,412,024 + -0.4 4,412,024 + -0.7 4,412,024 + -1.5 4,412,024 + +0.6 4,412,024 + +0.6 4,412,024 + -0.1 4,412,024 + +0.2 4,412,024 + -0.2 4,412,024 + +0.4 4,412,025 - -1.0 4,412,025 - -0.4 4,412,025 - +0.7 4,412,025 - +0.6 4,412,025 - +0.9 4,412,025 - +0.6 4,412,025 - -0.3 4,412,047 - -1.4
Or see this region's nucleotide sequence