Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2839

Experiment: KB with Phloretin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Phloretin 250 ug/ml
3,411,287	+		Psyr_2837	0.54	-0.5
3,411,306	-		Psyr_2837	0.56	-0.8
3,411,307	+		Psyr_2837	0.56	-1.0
3,411,308	-		Psyr_2837	0.56	-0.1
3,411,326	-		Psyr_2837	0.58	-0.4
3,411,349	+		Psyr_2837	0.60	-1.3
3,411,349	+		Psyr_2837	0.60	+0.6
3,411,349	+		Psyr_2837	0.60	-1.2
3,411,349	+		Psyr_2837	0.60	-1.6
3,411,349	+		Psyr_2837	0.60	-0.6
3,411,349	+		Psyr_2837	0.60	-1.8
3,411,349	+		Psyr_2837	0.60	-0.6
3,411,349	+		Psyr_2837	0.60	-0.7
3,411,349	+		Psyr_2837	0.60	-1.1
3,411,350	-		Psyr_2837	0.61	-0.0
3,411,350	-		Psyr_2837	0.61	+0.2
3,411,350	-		Psyr_2837	0.61	-2.5
3,411,350	-		Psyr_2837	0.61	-1.1
3,411,350	-		Psyr_2837	0.61	-0.9
3,411,384	+		Psyr_2837	0.64	+0.4
3,411,384	+		Psyr_2837	0.64	+0.4
3,411,384	+		Psyr_2837	0.64	-0.4
3,411,385	-		Psyr_2837	0.64	-0.5
3,411,385	-		Psyr_2837	0.64	-0.4
3,411,385	-		Psyr_2837	0.64	-0.3
3,411,402	-		Psyr_2837	0.66	-2.1
3,411,437	+		Psyr_2837	0.70	-0.1
3,411,438	-		Psyr_2837	0.70	-1.1
3,411,438	-		Psyr_2837	0.70	+0.3
3,411,438	-		Psyr_2837	0.70	-0.6
3,411,438	-		Psyr_2837	0.70	-2.8
3,411,449	+		Psyr_2837	0.71	-0.6
3,411,450	-		Psyr_2837	0.71	-0.1
3,411,450	-		Psyr_2837	0.71	-1.9
3,411,494	+		Psyr_2837	0.75	-0.5
3,411,495	-		Psyr_2837	0.76	-0.4
3,411,512	+		Psyr_2837	0.77	-0.0
3,411,517	+		Psyr_2837	0.78	+0.1
3,411,521	+		Psyr_2837	0.78	+2.0
3,411,521	+		Psyr_2837	0.78	+0.2
3,411,521	+		Psyr_2837	0.78	-1.4
3,411,522	-		Psyr_2837	0.78	-0.0
3,411,590	+		Psyr_2837	0.85	-1.4
3,411,591	-		Psyr_2837	0.86	+0.4
3,411,616	+		Psyr_2837	0.88	+0.4
3,411,616	+		Psyr_2837	0.88	+0.2
3,411,616	+		Psyr_2837	0.88	-1.4
3,411,743	+				+0.6
3,411,743	+				-0.9
3,411,743	+				-0.2
3,411,744	-				-0.1
3,411,746	+				+0.6
3,411,768	-				-0.4
3,411,806	-				+1.4
3,411,825	+				-0.6
3,411,825	+				+0.1
3,411,864	+				+1.1
3,411,864	+				-0.5
3,411,864	+				+0.4
3,411,864	+				+0.7
3,411,865	-				+0.4
3,411,865	-				-0.1
3,411,865	-				-0.4
3,411,899	+				+0.8
3,411,899	+				+0.3
3,411,899	+				-0.5
3,411,899	+				+0.5
3,411,899	+				+1.2
3,411,900	-				+0.6
3,411,900	-				+0.9
3,412,099	+		Psyr_2838	0.56	-1.6
3,412,099	+		Psyr_2838	0.56	+0.3
3,412,100	-		Psyr_2838	0.56	+1.1
3,412,100	-		Psyr_2838	0.56	-0.6
3,412,100	-		Psyr_2838	0.56	+1.3
3,412,187	+		Psyr_2838	0.81	-0.2
3,412,280	+				-0.0
3,412,280	+				-0.4
3,412,280	+				-0.0
3,412,280	+				+0.5
3,412,280	+				+0.1
3,412,280	+				-1.2
3,412,280	+				+0.8
3,412,280	+				-0.2
3,412,280	+				-0.6
3,412,281	-				+0.4
3,412,281	-				+1.7
3,412,281	-				-0.9
3,412,281	-				+0.2
3,412,281	-				-0.4
3,412,281	-				-0.0
3,412,301	+				+0.6
3,412,302	-				-1.6
3,412,302	-				+1.1
3,412,302	-				+0.9
3,412,476	+		Psyr_2839	0.24	+0.4
3,412,476	+		Psyr_2839	0.24	+2.0
3,412,476	+		Psyr_2839	0.24	-0.1
3,412,476	+		Psyr_2839	0.24	-1.3
3,412,476	+		Psyr_2839	0.24	+0.2
3,412,476	+		Psyr_2839	0.24	+1.5
3,412,476	+		Psyr_2839	0.24	+0.7
3,412,476	+		Psyr_2839	0.24	+1.7
3,412,476	+		Psyr_2839	0.24	+0.8
3,412,476	+		Psyr_2839	0.24	-0.2
3,412,476	+		Psyr_2839	0.24	+0.6
3,412,476	+		Psyr_2839	0.24	+0.7
3,412,477	-				-1.6
3,412,623	+		Psyr_2839	0.42	+0.1
3,412,670	+		Psyr_2839	0.48	-0.1
3,412,671	-		Psyr_2839	0.48	+1.2
3,413,099	-				-0.6
3,413,099	-				+1.0
3,413,231	+				+0.4
3,413,381	-		Psyr_2840	0.31	+0.5
3,413,389	-		Psyr_2840	0.32	+1.4
3,413,389	-		Psyr_2840	0.32	+1.4
3,413,527	-		Psyr_2840	0.56	+0.6
3,413,569	+		Psyr_2840	0.63	+2.0
3,413,570	-		Psyr_2840	0.63	+0.1
3,413,632	+		Psyr_2840	0.73	-0.5
3,413,633	-		Psyr_2840	0.74	-0.0
3,413,659	+		Psyr_2840	0.78	+1.1
3,413,660	-		Psyr_2840	0.78	-0.2
3,413,792	+				-0.2
3,413,792	+				+0.3
3,413,792	+				+1.1
3,413,793	-				+0.3
3,413,793	-				+0.4
3,413,793	-				-0.2
3,413,827	+				+1.4
3,413,827	+				-0.2
3,413,827	+				-2.6
3,413,827	+				+0.2
3,413,827	+				+1.4
3,413,827	+				+0.1
3,413,827	+				+1.7
3,413,827	+				-2.2
3,413,827	+				+1.0
3,413,827	+				+0.7
3,413,827	+				+0.6
3,413,827	+				-0.7
3,413,828	-				-0.6
3,413,828	-				+0.8
3,413,828	-				-0.3
3,413,828	-				-0.6
3,413,828	-				-0.6
3,413,828	-				-0.8
3,413,828	-				-0.3
3,413,828	-				+0.7
3,413,828	-				-0.3
3,413,828	-				-0.4
3,413,828	-				+0.4
3,413,828	-				-1.8
3,413,828	-				-0.4
3,413,828	-				+3.1
3,413,828	-				-0.3
3,413,828	-				+0.6
3,413,829	+				+0.1
3,413,829	+				-0.4
3,413,829	+				-0.3
3,413,830	-				-0.2
3,413,830	-				-0.6
3,413,830	-				+0.1
3,413,830	-				-1.2
3,413,830	-				-0.2
3,413,906	+				-0.4
3,413,906	+				+1.4
3,413,906	+				+1.6
3,413,907	-				+1.6
3,413,907	-				+1.6
3,413,927	+				-0.6
3,413,927	+				-0.4
3,413,927	+				+2.0
3,413,927	+				-0.2
3,413,927	+				-1.0
3,413,927	+				+0.6
3,413,927	+				+0.3
3,413,928	-				-0.6
3,413,928	-				+1.1
3,413,928	-				-0.5
3,413,971	+		Psyr_2841	0.13	-0.9
3,413,971	+		Psyr_2841	0.13	-0.1
3,413,971	+		Psyr_2841	0.13	+0.4
3,413,971	+		Psyr_2841	0.13	+0.4
3,413,971	+		Psyr_2841	0.13	-0.8
3,414,056	+		Psyr_2841	0.27	+0.4
3,414,056	+		Psyr_2841	0.27	-0.9
3,414,056	+		Psyr_2841	0.27	+0.8