Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2798

Experiment: KB with Phloretin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Phloretin 250 ug/ml
3,379,474	+		Psyr_2796	0.45	+0.0
3,379,498	+		Psyr_2796	0.49	+0.2
3,379,498	+		Psyr_2796	0.49	-1.1
3,379,498	+		Psyr_2796	0.49	+0.7
3,379,498	+		Psyr_2796	0.49	+0.7
3,379,498	+		Psyr_2796	0.49	-0.0
3,379,498	+		Psyr_2796	0.49	+0.4
3,379,499	-		Psyr_2796	0.49	+0.6
3,379,499	-		Psyr_2796	0.49	-1.0
3,379,499	-		Psyr_2796	0.49	-2.2
3,379,499	-		Psyr_2796	0.49	-0.0
3,379,499	-		Psyr_2796	0.49	+0.7
3,379,506	+		Psyr_2796	0.50	-0.5
3,379,507	-		Psyr_2796	0.51	-2.1
3,379,507	-		Psyr_2796	0.51	-0.9
3,379,728	+		Psyr_2796	0.86	-0.2
3,379,729	-		Psyr_2796	0.86	-0.4
3,379,883	+				-2.1
3,379,897	-				+0.1
3,379,908	-		Psyr_2797	0.10	-0.3
3,379,975	+		Psyr_2797	0.24	-1.1
3,379,976	-		Psyr_2797	0.24	+0.4
3,380,090	-		Psyr_2797	0.46	-0.3
3,380,105	-		Psyr_2797	0.49	-0.2
3,380,134	+		Psyr_2797	0.55	-3.7
3,380,214	+		Psyr_2797	0.70	-1.5
3,380,214	+		Psyr_2797	0.70	+0.4
3,380,215	-		Psyr_2797	0.71	+2.0
3,380,215	-		Psyr_2797	0.71	-1.2
3,380,240	+		Psyr_2797	0.75	-1.9
3,380,241	-		Psyr_2797	0.76	+0.4
3,380,253	+		Psyr_2797	0.78	-1.5
3,380,253	+		Psyr_2797	0.78	-1.2
3,380,254	-		Psyr_2797	0.78	+0.0
3,380,274	-		Psyr_2797	0.82	-0.4
3,380,306	+		Psyr_2797	0.88	-1.3
3,380,307	-		Psyr_2797	0.89	+0.1
3,380,307	-		Psyr_2797	0.89	-1.1
3,380,311	-		Psyr_2797	0.89	+1.0
3,380,311	-		Psyr_2797	0.89	-0.1
3,380,335	+				+1.1
3,380,336	-				+0.4
3,380,380	+				-2.2
3,380,402	-				+0.8
3,380,406	-				-0.2
3,380,423	+				-0.3
3,380,428	-				-1.9
3,380,476	-		Psyr_2798	0.17	-0.4
3,380,519	+		Psyr_2798	0.26	+0.6
3,380,519	+		Psyr_2798	0.26	-0.6
3,380,520	-		Psyr_2798	0.27	-0.8
3,380,557	+		Psyr_2798	0.35	-1.2
3,380,557	+		Psyr_2798	0.35	-0.7
3,380,557	+		Psyr_2798	0.35	-1.0
3,380,557	+		Psyr_2798	0.35	-0.6
3,380,557	+		Psyr_2798	0.35	-0.6
3,380,557	+		Psyr_2798	0.35	+0.4
3,380,557	+		Psyr_2798	0.35	+1.4
3,380,557	+		Psyr_2798	0.35	-0.4
3,380,558	-		Psyr_2798	0.35	-0.0
3,380,558	-		Psyr_2798	0.35	-1.0
3,380,558	-		Psyr_2798	0.35	+0.8
3,380,613	+		Psyr_2798	0.47	-0.7
3,380,613	+		Psyr_2798	0.47	-0.6
3,380,617	+		Psyr_2798	0.48	+0.1
3,380,617	+		Psyr_2798	0.48	-1.2
3,380,617	+		Psyr_2798	0.48	+0.2
3,380,617	+		Psyr_2798	0.48	-0.9
3,380,618	-		Psyr_2798	0.48	-1.0
3,380,618	-		Psyr_2798	0.48	-1.2
3,380,618	-		Psyr_2798	0.48	-0.0
3,380,618	-		Psyr_2798	0.48	-1.3
3,380,618	-		Psyr_2798	0.48	+0.2
3,380,618	-		Psyr_2798	0.48	+1.4
3,380,618	-				+0.4
3,380,618	-		Psyr_2798	0.48	-0.6
3,380,713	-		Psyr_2798	0.70	+1.1
3,380,713	-		Psyr_2798	0.70	-0.6
3,380,713	-		Psyr_2798	0.70	-1.8
3,380,776	+		Psyr_2798	0.84	+0.4
3,380,777	-		Psyr_2798	0.84	-0.3
3,380,777	-		Psyr_2798	0.84	-1.3
3,380,812	+				-0.2
3,380,833	+				+1.0
3,380,834	-				-0.6
3,380,834	-				-1.9
3,380,873	-				+1.7
3,380,890	+				-0.6
3,380,937	+				+0.5
3,380,950	-				-1.6
3,380,966	-				+0.6
3,380,975	+				+2.0
3,380,975	+				-1.0
3,380,975	+				-0.6
3,380,975	+				-1.9
3,380,975	+				+0.4
3,380,975	+				-0.0
3,380,975	+				+1.1
3,380,976	-				-0.6
3,380,976	-				+0.4
3,380,976	-				-0.2
3,380,979	+				-0.6
3,380,979	+				-0.2
3,380,979	+				-0.4
3,380,980	-				+1.9
3,380,980	-				-0.6
3,381,043	+		Psyr_2799	0.23	+0.0
3,381,043	+		Psyr_2799	0.23	-0.9
3,381,043	+		Psyr_2799	0.23	-2.6
3,381,043	+		Psyr_2799	0.23	-0.3
3,381,043	+		Psyr_2799	0.23	-0.5
3,381,044	-		Psyr_2799	0.24	-0.4
3,381,044	-		Psyr_2799	0.24	-0.1
3,381,044	-		Psyr_2799	0.24	+1.3
3,381,044	-		Psyr_2799	0.24	-0.8
3,381,044	-		Psyr_2799	0.24	-0.9
3,381,044	-		Psyr_2799	0.24	-1.0
3,381,044	-		Psyr_2799	0.24	-1.1
3,381,121	+		Psyr_2799	0.52	-0.8
3,381,179	-		Psyr_2799	0.74	-0.2
3,381,219	-		Psyr_2799	0.89	+1.6
3,381,251	+				+0.1
3,381,251	+				-0.3
3,381,252	-				+0.5
3,381,252	-				-0.3
3,381,252	-				+1.1
3,381,276	-				+2.0
3,381,290	-				+0.4
3,381,292	-				-2.2
3,381,689	+				+1.3
3,381,690	-				-1.2
3,381,690	-				-0.6
3,381,690	-				+1.5
3,381,698	+				+1.1
3,381,698	+				-0.4
3,381,698	+				-3.4
3,381,698	+				-0.9
3,381,698	+				-0.1
3,381,699	-				+0.2
3,381,699	-				-0.7
3,381,699	-				-0.9
3,381,732	-				+1.2
3,381,832	+		Psyr_2801	0.29	+1.0
3,381,832	+		Psyr_2801	0.29	+0.5
3,381,833	-		Psyr_2801	0.30	-0.4
3,381,833	-		Psyr_2801	0.30	+0.8
3,381,841	+		Psyr_2801	0.31	+1.0
3,381,842	-		Psyr_2801	0.32	-1.9
3,381,843	+		Psyr_2801	0.32	+1.7
3,381,843	+		Psyr_2801	0.32	-0.2
3,381,843	+		Psyr_2801	0.32	-0.1
3,381,844	-		Psyr_2801	0.32	+0.1
3,381,844	-		Psyr_2801	0.32	+0.8
3,381,844	-		Psyr_2801	0.32	-0.4
3,381,844	-		Psyr_2801	0.32	-0.0