Experiment: sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_334 and Pf6N2E2_335 are separated by 100 nucleotides Pf6N2E2_335 and Pf6N2E2_336 overlap by 4 nucleotides Pf6N2E2_336 and Pf6N2E2_337 are separated by 173 nucleotides
Pf6N2E2_334 - Transcriptional regulator, at 401,717 to 402,670
_334
Pf6N2E2_335 - Aldo-keto reductase, at 402,771 to 403,634
_335
Pf6N2E2_336 - hypothetical protein, at 403,631 to 404,413
_336
Pf6N2E2_337 - hypothetical protein, at 404,587 to 404,859
_337
Position (kb) 402
403
404 Strain fitness (log2 ratio) -1
0
1
2 at 401.838 kb on + strand, within Pf6N2E2_334 at 401.841 kb on + strand, within Pf6N2E2_334 at 401.910 kb on + strand, within Pf6N2E2_334 at 401.937 kb on + strand, within Pf6N2E2_334 at 401.937 kb on + strand, within Pf6N2E2_334 at 401.937 kb on + strand, within Pf6N2E2_334 at 401.938 kb on - strand, within Pf6N2E2_334 at 401.957 kb on + strand, within Pf6N2E2_334 at 401.958 kb on - strand, within Pf6N2E2_334 at 402.051 kb on + strand, within Pf6N2E2_334 at 402.051 kb on + strand, within Pf6N2E2_334 at 402.150 kb on + strand, within Pf6N2E2_334 at 402.150 kb on + strand, within Pf6N2E2_334 at 402.151 kb on - strand, within Pf6N2E2_334 at 402.211 kb on + strand, within Pf6N2E2_334 at 402.212 kb on - strand, within Pf6N2E2_334 at 402.337 kb on + strand, within Pf6N2E2_334 at 402.686 kb on - strand at 402.733 kb on + strand at 402.733 kb on + strand at 402.733 kb on + strand at 402.733 kb on + strand at 402.733 kb on + strand at 402.734 kb on - strand at 402.734 kb on - strand at 402.734 kb on - strand at 402.734 kb on - strand at 402.734 kb on - strand at 402.734 kb on - strand at 402.957 kb on + strand, within Pf6N2E2_335 at 403.006 kb on - strand, within Pf6N2E2_335 at 403.332 kb on + strand, within Pf6N2E2_335 at 403.332 kb on + strand, within Pf6N2E2_335 at 403.395 kb on + strand, within Pf6N2E2_335 at 403.395 kb on + strand, within Pf6N2E2_335 at 403.396 kb on - strand, within Pf6N2E2_335 at 403.396 kb on - strand, within Pf6N2E2_335 at 403.396 kb on - strand, within Pf6N2E2_335 at 403.633 kb on - strand at 403.865 kb on + strand, within Pf6N2E2_336 at 403.865 kb on + strand, within Pf6N2E2_336 at 403.865 kb on + strand, within Pf6N2E2_336 at 403.865 kb on + strand, within Pf6N2E2_336 at 403.866 kb on - strand, within Pf6N2E2_336 at 403.866 kb on - strand at 403.866 kb on - strand, within Pf6N2E2_336 at 403.938 kb on + strand, within Pf6N2E2_336 at 403.938 kb on + strand, within Pf6N2E2_336 at 403.938 kb on + strand, within Pf6N2E2_336 at 404.039 kb on - strand, within Pf6N2E2_336 at 404.039 kb on - strand, within Pf6N2E2_336 at 404.039 kb on - strand, within Pf6N2E2_336 at 404.116 kb on - strand, within Pf6N2E2_336 at 404.467 kb on + strand at 404.467 kb on + strand at 404.536 kb on + strand at 404.536 kb on + strand at 404.536 kb on + strand at 404.537 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 12.5 mM remove 401,838 + Pf6N2E2_334 0.13 -0.3 401,841 + Pf6N2E2_334 0.13 +0.3 401,910 + Pf6N2E2_334 0.20 -0.2 401,937 + Pf6N2E2_334 0.23 -0.1 401,937 + Pf6N2E2_334 0.23 -0.0 401,937 + Pf6N2E2_334 0.23 +1.0 401,938 - Pf6N2E2_334 0.23 -0.0 401,957 + Pf6N2E2_334 0.25 +0.5 401,958 - Pf6N2E2_334 0.25 +0.9 402,051 + Pf6N2E2_334 0.35 +0.1 402,051 + Pf6N2E2_334 0.35 -0.2 402,150 + Pf6N2E2_334 0.45 +0.8 402,150 + Pf6N2E2_334 0.45 -0.0 402,151 - Pf6N2E2_334 0.45 -0.3 402,211 + Pf6N2E2_334 0.52 +0.1 402,212 - Pf6N2E2_334 0.52 -0.5 402,337 + Pf6N2E2_334 0.65 -0.1 402,686 - -1.5 402,733 + +0.5 402,733 + +0.1 402,733 + -0.0 402,733 + +0.5 402,733 + -0.7 402,734 - -0.6 402,734 - -0.6 402,734 - -1.2 402,734 - +0.9 402,734 - -0.3 402,734 - -0.4 402,957 + Pf6N2E2_335 0.22 -0.5 403,006 - Pf6N2E2_335 0.27 -1.0 403,332 + Pf6N2E2_335 0.65 +0.2 403,332 + Pf6N2E2_335 0.65 +0.1 403,395 + Pf6N2E2_335 0.72 -0.2 403,395 + Pf6N2E2_335 0.72 -0.8 403,396 - Pf6N2E2_335 0.72 +0.0 403,396 - Pf6N2E2_335 0.72 +0.3 403,396 - Pf6N2E2_335 0.72 -0.6 403,633 - +0.4 403,865 + Pf6N2E2_336 0.30 +0.1 403,865 + Pf6N2E2_336 0.30 +1.2 403,865 + Pf6N2E2_336 0.30 +0.6 403,865 + Pf6N2E2_336 0.30 +0.3 403,866 - Pf6N2E2_336 0.30 -0.3 403,866 - +2.4 403,866 - Pf6N2E2_336 0.30 -0.3 403,938 + Pf6N2E2_336 0.39 +1.0 403,938 + Pf6N2E2_336 0.39 -0.4 403,938 + Pf6N2E2_336 0.39 -0.6 404,039 - Pf6N2E2_336 0.52 +0.3 404,039 - Pf6N2E2_336 0.52 +0.4 404,039 - Pf6N2E2_336 0.52 +0.5 404,116 - Pf6N2E2_336 0.62 +1.1 404,467 + -0.2 404,467 + +1.3 404,536 + -0.1 404,536 + +0.2 404,536 + +0.5 404,537 - +0.4
Or see this region's nucleotide sequence