Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3883

Experiment: acetate 40 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate 40 mM
3,989,165	+		Ga0059261_3881	0.78	-0.2
3,989,166	-		Ga0059261_3881	0.78	+0.0
3,989,167	+		Ga0059261_3881	0.78	-0.8
3,989,167	+		Ga0059261_3881	0.78	-0.1
3,989,167	+		Ga0059261_3881	0.78	-1.0
3,989,167	+		Ga0059261_3881	0.78	+0.4
3,989,167	+		Ga0059261_3881	0.78	-0.8
3,989,167	+		Ga0059261_3881	0.78	-0.2
3,989,167	+		Ga0059261_3881	0.78	+0.2
3,989,167	+		Ga0059261_3881	0.78	+0.5
3,989,167	+		Ga0059261_3881	0.78	+0.6
3,989,168	-		Ga0059261_3881	0.78	-0.3
3,989,168	-		Ga0059261_3881	0.78	+0.1
3,989,168	-		Ga0059261_3881	0.78	-0.1
3,989,168	-		Ga0059261_3881	0.78	+1.2
3,989,168	-		Ga0059261_3881	0.78	-0.5
3,989,325	-		Ga0059261_3881	0.84	+0.8
3,989,339	-		Ga0059261_3881	0.85	-0.0
3,989,339	-		Ga0059261_3881	0.85	+1.4
3,989,339	-		Ga0059261_3881	0.85	-0.6
3,989,500	+				+0.1
3,989,500	+				+0.1
3,989,500	+				+0.2
3,989,500	+				-0.1
3,989,501	-				+1.0
3,989,501	-				-0.3
3,989,501	-				+0.3
3,989,756	+				-0.3
3,989,756	+				+0.2
3,989,756	+				+0.4
3,989,757	-				+0.0
3,989,757	-				-0.1
3,989,757	-				-0.2
3,989,799	+				+0.2
3,989,799	+				-0.2
3,989,799	+				+0.2
3,989,799	+				+0.0
3,989,799	+				-0.4
3,989,799	+				-1.2
3,989,809	+				-0.8
3,989,810	-				-0.4
3,989,810	-				-0.0
3,989,810	-				-0.4
3,989,810	-				-0.4
3,989,858	+				+0.0
3,989,858	+				-0.3
3,989,859	-				+0.0
3,989,951	-				+0.5
3,989,951	-				-0.0
3,990,029	+		Ga0059261_3882	0.57	+0.3
3,990,029	+		Ga0059261_3882	0.57	+1.0
3,990,029	+		Ga0059261_3882	0.57	-0.4
3,990,030	-		Ga0059261_3882	0.58	+0.1
3,990,168	+				-0.2
3,990,168	+				-0.5
3,990,168	+				-1.1
3,990,169	-				-0.8
3,990,169	-				+0.3
3,990,169	-				+0.5
3,990,169	-				-0.1
3,990,169	-				+0.8
3,990,169	-				-0.1
3,990,225	+				-0.4
3,990,225	+				-0.4
3,990,225	+				-0.1
3,990,225	+				-0.1
3,990,225	+				+0.7
3,990,226	-				+2.2
3,990,226	-				-0.2
3,990,226	-				-0.6
3,990,273	+		Ga0059261_3883	0.11	-0.3
3,990,284	+		Ga0059261_3883	0.12	+1.0
3,990,284	+		Ga0059261_3883	0.12	-0.2
3,990,284	+		Ga0059261_3883	0.12	-0.6
3,990,284	+		Ga0059261_3883	0.12	-0.7
3,990,285	-		Ga0059261_3883	0.12	-1.2
3,990,285	-		Ga0059261_3883	0.12	+0.1
3,990,285	-				-0.5
3,990,321	+		Ga0059261_3883	0.14	-1.3
3,990,321	+		Ga0059261_3883	0.14	+0.8
3,990,321	+		Ga0059261_3883	0.14	-0.4
3,990,322	-		Ga0059261_3883	0.14	+1.0
3,990,322	-		Ga0059261_3883	0.14	-0.4
3,990,416	+		Ga0059261_3883	0.20	-0.1
3,990,417	-		Ga0059261_3883	0.20	-0.9
3,990,441	+		Ga0059261_3883	0.21	-0.3
3,990,441	+		Ga0059261_3883	0.21	+0.2
3,990,441	+		Ga0059261_3883	0.21	-0.6
3,990,442	-		Ga0059261_3883	0.21	-0.1
3,990,442	-		Ga0059261_3883	0.21	-2.7
3,990,442	-		Ga0059261_3883	0.21	-0.4
3,990,615	+		Ga0059261_3883	0.32	-0.2
3,990,615	+		Ga0059261_3883	0.32	-0.2
3,990,615	+		Ga0059261_3883	0.32	+0.7
3,990,615	+		Ga0059261_3883	0.32	-0.9
3,990,615	+		Ga0059261_3883	0.32	+0.6
3,990,615	+		Ga0059261_3883	0.32	+1.0
3,990,616	-		Ga0059261_3883	0.32	-0.7
3,990,616	-		Ga0059261_3883	0.32	-1.1
3,990,642	+		Ga0059261_3883	0.33	+0.1
3,990,642	+		Ga0059261_3883	0.33	-0.3
3,990,643	-		Ga0059261_3883	0.33	+0.0
3,990,643	-		Ga0059261_3883	0.33	-0.7
3,990,643	-		Ga0059261_3883	0.33	+0.6
3,990,776	+		Ga0059261_3883	0.41	-0.9
3,990,777	-		Ga0059261_3883	0.41	+0.1
3,990,839	+		Ga0059261_3883	0.45	+0.0
3,990,984	+		Ga0059261_3883	0.53	+0.1
3,990,984	+		Ga0059261_3883	0.53	-0.2
3,991,043	+		Ga0059261_3883	0.57	-0.1
3,991,044	-		Ga0059261_3883	0.57	+1.1
3,991,044	-		Ga0059261_3883	0.57	-0.1
3,991,044	-		Ga0059261_3883	0.57	+0.2
3,991,227	+		Ga0059261_3883	0.67	-1.2
3,991,227	+		Ga0059261_3883	0.67	+1.2
3,991,227	+		Ga0059261_3883	0.67	-0.6
3,991,227	+		Ga0059261_3883	0.67	+1.0
3,991,227	+		Ga0059261_3883	0.67	+0.1
3,991,227	+		Ga0059261_3883	0.67	-1.0
3,991,228	-		Ga0059261_3883	0.67	-2.4
3,991,296	+		Ga0059261_3883	0.71	+0.4
3,991,296	+		Ga0059261_3883	0.71	-0.2
3,991,296	+		Ga0059261_3883	0.71	-0.2
3,991,296	+		Ga0059261_3883	0.71	-0.1
3,991,296	+		Ga0059261_3883	0.71	-0.2
3,991,297	-		Ga0059261_3883	0.72	-1.2
3,991,297	-		Ga0059261_3883	0.72	+0.2
3,991,297	-		Ga0059261_3883	0.72	-0.0
3,991,297	-		Ga0059261_3883	0.72	+0.0
3,991,297	-		Ga0059261_3883	0.72	-1.2
3,991,297	-		Ga0059261_3883	0.72	-0.2
3,991,458	+		Ga0059261_3883	0.81	-0.2
3,991,458	+		Ga0059261_3883	0.81	+0.2
3,991,458	+		Ga0059261_3883	0.81	-0.6
3,991,459	-		Ga0059261_3883	0.81	+0.0
3,991,459	-		Ga0059261_3883	0.81	-0.2
3,991,459	-		Ga0059261_3883	0.81	+1.0
3,991,465	-		Ga0059261_3883	0.81	-0.4
3,991,465	-		Ga0059261_3883	0.81	+0.2
3,991,465	-		Ga0059261_3883	0.81	+1.7
3,991,465	-		Ga0059261_3883	0.81	-0.0
3,991,466	+		Ga0059261_3883	0.81	-0.2
3,991,466	+		Ga0059261_3883	0.81	-0.7
3,991,466	+		Ga0059261_3883	0.81	+0.3
3,991,466	+		Ga0059261_3883	0.81	+0.9
3,991,466	+		Ga0059261_3883	0.81	+0.2
3,991,467	-		Ga0059261_3883	0.82	-0.3
3,991,467	-		Ga0059261_3883	0.82	-0.1
3,991,528	-		Ga0059261_3883	0.85	-0.4
3,991,528	-		Ga0059261_3883	0.85	-0.2
3,991,528	-		Ga0059261_3883	0.85	+0.4
3,991,528	-		Ga0059261_3883	0.85	+0.3
3,991,620	+				+0.3
3,991,620	+				-0.0
3,991,621	-				+1.2
3,991,621	-				+0.5
3,991,621	-				+1.0
3,992,504	+		Ga0059261_3884	0.35	-0.2
3,992,504	+		Ga0059261_3884	0.35	+0.1
3,992,504	+		Ga0059261_3884	0.35	-0.3
3,992,505	-		Ga0059261_3884	0.35	+0.4
3,992,505	-		Ga0059261_3884	0.35	+0.6
3,992,755	-		Ga0059261_3884	0.47	-0.3