Experiment: R2A with Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03675 and CA265_RS03680 overlap by 11 nucleotides CA265_RS03680 and CA265_RS03685 are separated by 2 nucleotides CA265_RS03685 and CA265_RS03690 are separated by 24 nucleotides
CA265_RS03675: CA265_RS03675 - hypothetical protein, at 876,042 to 876,695
_RS03675
CA265_RS03680: CA265_RS03680 - RNA 2'-phosphotransferase, at 876,685 to 877,227
_RS03680
CA265_RS03685: CA265_RS03685 - serine/threonine protein phosphatase, at 877,230 to 877,961
_RS03685
CA265_RS03690: CA265_RS03690 - nicotinate phosphoribosyltransferase, at 877,986 to 879,443
_RS03690
Position (kb) 877
878 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 876.304 kb on + strand, within CA265_RS03675 at 876.304 kb on + strand, within CA265_RS03675 at 876.305 kb on - strand, within CA265_RS03675 at 876.333 kb on + strand, within CA265_RS03675 at 876.500 kb on + strand, within CA265_RS03675 at 876.538 kb on + strand, within CA265_RS03675 at 876.607 kb on + strand, within CA265_RS03675 at 876.694 kb on - strand at 876.711 kb on + strand at 876.711 kb on + strand at 876.723 kb on - strand at 876.755 kb on + strand, within CA265_RS03680 at 876.854 kb on - strand, within CA265_RS03680 at 876.854 kb on - strand, within CA265_RS03680 at 876.933 kb on + strand, within CA265_RS03680 at 876.933 kb on + strand, within CA265_RS03680 at 876.933 kb on + strand, within CA265_RS03680 at 876.934 kb on - strand, within CA265_RS03680 at 876.971 kb on + strand, within CA265_RS03680 at 876.972 kb on - strand, within CA265_RS03680 at 876.982 kb on + strand, within CA265_RS03680 at 876.982 kb on + strand, within CA265_RS03680 at 877.015 kb on - strand, within CA265_RS03680 at 877.086 kb on + strand, within CA265_RS03680 at 877.099 kb on - strand, within CA265_RS03680 at 877.116 kb on + strand, within CA265_RS03680 at 877.118 kb on + strand, within CA265_RS03680 at 877.216 kb on - strand at 877.218 kb on - strand at 877.243 kb on + strand at 877.247 kb on - strand at 877.250 kb on - strand at 877.256 kb on + strand at 877.257 kb on - strand at 877.257 kb on - strand at 877.306 kb on + strand, within CA265_RS03685 at 877.341 kb on + strand, within CA265_RS03685 at 877.373 kb on - strand, within CA265_RS03685 at 877.467 kb on - strand, within CA265_RS03685 at 877.471 kb on + strand, within CA265_RS03685 at 877.472 kb on - strand, within CA265_RS03685 at 877.472 kb on - strand, within CA265_RS03685 at 877.472 kb on - strand, within CA265_RS03685 at 877.508 kb on + strand, within CA265_RS03685 at 877.518 kb on + strand, within CA265_RS03685 at 877.656 kb on + strand, within CA265_RS03685 at 877.657 kb on - strand, within CA265_RS03685 at 877.669 kb on - strand, within CA265_RS03685 at 877.736 kb on - strand, within CA265_RS03685 at 877.801 kb on - strand, within CA265_RS03685 at 877.801 kb on - strand, within CA265_RS03685 at 877.803 kb on - strand, within CA265_RS03685 at 877.803 kb on - strand, within CA265_RS03685 at 877.803 kb on - strand, within CA265_RS03685 at 877.829 kb on + strand, within CA265_RS03685 at 877.830 kb on - strand, within CA265_RS03685 at 877.873 kb on + strand, within CA265_RS03685 at 877.922 kb on - strand at 877.974 kb on + strand at 877.980 kb on - strand at 877.999 kb on + strand at 877.999 kb on + strand at 878.020 kb on + strand at 878.021 kb on - strand at 878.048 kb on + strand at 878.101 kb on + strand at 878.150 kb on + strand, within CA265_RS03690 at 878.151 kb on - strand, within CA265_RS03690 at 878.162 kb on + strand, within CA265_RS03690 at 878.294 kb on + strand, within CA265_RS03690 at 878.295 kb on - strand, within CA265_RS03690 at 878.304 kb on - strand, within CA265_RS03690 at 878.351 kb on + strand, within CA265_RS03690 at 878.358 kb on + strand, within CA265_RS03690 at 878.358 kb on + strand, within CA265_RS03690 at 878.358 kb on + strand, within CA265_RS03690 at 878.359 kb on - strand, within CA265_RS03690 at 878.359 kb on - strand, within CA265_RS03690 at 878.391 kb on - strand, within CA265_RS03690 at 878.407 kb on + strand, within CA265_RS03690 at 878.408 kb on - strand, within CA265_RS03690 at 878.481 kb on + strand, within CA265_RS03690 at 878.481 kb on + strand, within CA265_RS03690 at 878.482 kb on - strand, within CA265_RS03690 at 878.482 kb on - strand, within CA265_RS03690 at 878.541 kb on - strand, within CA265_RS03690 at 878.646 kb on + strand, within CA265_RS03690 at 878.647 kb on - strand, within CA265_RS03690 at 878.650 kb on - strand, within CA265_RS03690 at 878.789 kb on - strand, within CA265_RS03690 at 878.824 kb on + strand, within CA265_RS03690 at 878.825 kb on - strand, within CA265_RS03690 at 878.858 kb on + strand, within CA265_RS03690 at 878.859 kb on - strand, within CA265_RS03690 at 878.859 kb on - strand, within CA265_RS03690
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Cobalt chloride 0.08 mM remove 876,304 + CA265_RS03675 0.40 -0.1 876,304 + CA265_RS03675 0.40 -1.9 876,305 - CA265_RS03675 0.40 +0.7 876,333 + CA265_RS03675 0.44 +0.1 876,500 + CA265_RS03675 0.70 +0.5 876,538 + CA265_RS03675 0.76 -0.4 876,607 + CA265_RS03675 0.86 -0.5 876,694 - +0.6 876,711 + -1.3 876,711 + -0.5 876,723 - +0.8 876,755 + CA265_RS03680 0.13 +0.9 876,854 - CA265_RS03680 0.31 +0.1 876,854 - CA265_RS03680 0.31 +0.4 876,933 + CA265_RS03680 0.46 -0.8 876,933 + CA265_RS03680 0.46 +0.4 876,933 + CA265_RS03680 0.46 +0.4 876,934 - CA265_RS03680 0.46 +1.0 876,971 + CA265_RS03680 0.53 -0.6 876,972 - CA265_RS03680 0.53 +0.4 876,982 + CA265_RS03680 0.55 +0.2 876,982 + CA265_RS03680 0.55 -1.3 877,015 - CA265_RS03680 0.61 +0.5 877,086 + CA265_RS03680 0.74 -0.1 877,099 - CA265_RS03680 0.76 -0.3 877,116 + CA265_RS03680 0.79 -1.0 877,118 + CA265_RS03680 0.80 -0.2 877,216 - +0.3 877,218 - +0.6 877,243 + +0.3 877,247 - -0.2 877,250 - -1.0 877,256 + +0.2 877,257 - -0.0 877,257 - -0.4 877,306 + CA265_RS03685 0.10 -0.9 877,341 + CA265_RS03685 0.15 +0.1 877,373 - CA265_RS03685 0.20 +0.2 877,467 - CA265_RS03685 0.32 +0.6 877,471 + CA265_RS03685 0.33 -0.7 877,472 - CA265_RS03685 0.33 -0.2 877,472 - CA265_RS03685 0.33 -0.3 877,472 - CA265_RS03685 0.33 +0.4 877,508 + CA265_RS03685 0.38 -0.8 877,518 + CA265_RS03685 0.39 -1.1 877,656 + CA265_RS03685 0.58 -0.3 877,657 - CA265_RS03685 0.58 +0.3 877,669 - CA265_RS03685 0.60 +0.2 877,736 - CA265_RS03685 0.69 +1.3 877,801 - CA265_RS03685 0.78 +0.1 877,801 - CA265_RS03685 0.78 -0.5 877,803 - CA265_RS03685 0.78 -0.6 877,803 - CA265_RS03685 0.78 -0.4 877,803 - CA265_RS03685 0.78 -2.8 877,829 + CA265_RS03685 0.82 +0.4 877,830 - CA265_RS03685 0.82 -1.7 877,873 + CA265_RS03685 0.88 -0.8 877,922 - +0.4 877,974 + -0.3 877,980 - +0.1 877,999 + +0.4 877,999 + +0.0 878,020 + -0.3 878,021 - +1.0 878,048 + -1.2 878,101 + -0.2 878,150 + CA265_RS03690 0.11 -0.6 878,151 - CA265_RS03690 0.11 -0.8 878,162 + CA265_RS03690 0.12 -0.5 878,294 + CA265_RS03690 0.21 +1.9 878,295 - CA265_RS03690 0.21 +0.6 878,304 - CA265_RS03690 0.22 +0.0 878,351 + CA265_RS03690 0.25 +2.2 878,358 + CA265_RS03690 0.26 -1.2 878,358 + CA265_RS03690 0.26 -0.5 878,358 + CA265_RS03690 0.26 -0.4 878,359 - CA265_RS03690 0.26 +0.6 878,359 - CA265_RS03690 0.26 +0.5 878,391 - CA265_RS03690 0.28 -0.5 878,407 + CA265_RS03690 0.29 -0.3 878,408 - CA265_RS03690 0.29 -0.4 878,481 + CA265_RS03690 0.34 -1.3 878,481 + CA265_RS03690 0.34 -0.8 878,482 - CA265_RS03690 0.34 -0.6 878,482 - CA265_RS03690 0.34 +0.5 878,541 - CA265_RS03690 0.38 -0.4 878,646 + CA265_RS03690 0.45 +0.8 878,647 - CA265_RS03690 0.45 -0.2 878,650 - CA265_RS03690 0.46 -1.1 878,789 - CA265_RS03690 0.55 +1.3 878,824 + CA265_RS03690 0.57 -1.0 878,825 - CA265_RS03690 0.58 +0.1 878,858 + CA265_RS03690 0.60 -0.1 878,859 - CA265_RS03690 0.60 -0.3 878,859 - CA265_RS03690 0.60 +0.1
Or see this region's nucleotide sequence