Experiment: Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS23195 and BPHYT_RS23200 are separated by 319 nucleotides BPHYT_RS23200 and BPHYT_RS23205 are separated by 183 nucleotides BPHYT_RS23205 and BPHYT_RS23210 are separated by 78 nucleotides
BPHYT_RS23195: BPHYT_RS23195 - cytochrome P460, at 769,494 to 770,513
_RS23195
BPHYT_RS23200: BPHYT_RS23200 - cupin, at 770,833 to 771,249
_RS23200
BPHYT_RS23205: BPHYT_RS23205 - alkylhydroperoxidase, at 771,433 to 772,038
_RS23205
BPHYT_RS23210: BPHYT_RS23210 - MFS transporter, at 772,117 to 773,367
_RS23210
Position (kb) 771
772
773 Strain fitness (log2 ratio) -1
0
1 at 770.493 kb on - strand at 770.672 kb on + strand at 771.111 kb on + strand, within BPHYT_RS23200 at 771.113 kb on + strand, within BPHYT_RS23200 at 771.114 kb on - strand, within BPHYT_RS23200 at 771.114 kb on - strand, within BPHYT_RS23200 at 771.114 kb on - strand, within BPHYT_RS23200 at 771.114 kb on - strand, within BPHYT_RS23200 at 771.322 kb on + strand at 771.391 kb on - strand at 771.404 kb on + strand at 771.405 kb on - strand at 771.691 kb on + strand, within BPHYT_RS23205 at 771.988 kb on + strand at 772.503 kb on - strand, within BPHYT_RS23210 at 772.876 kb on + strand, within BPHYT_RS23210
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.5 mM remove 770,493 - +0.7 770,672 + -0.3 771,111 + BPHYT_RS23200 0.67 -0.1 771,113 + BPHYT_RS23200 0.67 +0.1 771,114 - BPHYT_RS23200 0.67 -0.4 771,114 - BPHYT_RS23200 0.67 -1.4 771,114 - BPHYT_RS23200 0.67 +0.0 771,114 - BPHYT_RS23200 0.67 -0.9 771,322 + -0.2 771,391 - -1.0 771,404 + +0.5 771,405 - -0.7 771,691 + BPHYT_RS23205 0.43 -0.8 771,988 + -0.0 772,503 - BPHYT_RS23210 0.31 +1.2 772,876 + BPHYT_RS23210 0.61 -0.3
Or see this region's nucleotide sequence