Experiment: Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS21520 and BPHYT_RS21525 are separated by 125 nucleotides BPHYT_RS21525 and BPHYT_RS21530 are separated by 178 nucleotides BPHYT_RS21530 and BPHYT_RS21535 are separated by 12 nucleotides BPHYT_RS21535 and BPHYT_RS21540 are separated by 2 nucleotides BPHYT_RS21540 and BPHYT_RS21545 are separated by 92 nucleotides
BPHYT_RS21520: BPHYT_RS21520 - ABC transporter substrate-binding protein, at 389,675 to 390,883
_RS21520
BPHYT_RS21525: BPHYT_RS21525 - hypothetical protein, at 391,009 to 391,260
_RS21525
BPHYT_RS21530: BPHYT_RS21530 - RNA polymerase subunit sigma-24, at 391,439 to 391,993
_RS21530
BPHYT_RS21535: BPHYT_RS21535 - hypothetical protein, at 392,006 to 392,314
_RS21535
BPHYT_RS21540: BPHYT_RS21540 - 4Fe-4S ferredoxin, at 392,317 to 392,613
_RS21540
BPHYT_RS21545: BPHYT_RS21545 - SAM-dependent methyltransferase, at 392,706 to 393,422
_RS21545
Position (kb) 391
392 Strain fitness (log2 ratio) -1
0
1 at 390.563 kb on + strand, within BPHYT_RS21520 at 390.563 kb on + strand, within BPHYT_RS21520 at 390.563 kb on + strand, within BPHYT_RS21520 at 390.564 kb on - strand, within BPHYT_RS21520 at 390.575 kb on + strand, within BPHYT_RS21520 at 390.576 kb on - strand, within BPHYT_RS21520 at 390.584 kb on + strand, within BPHYT_RS21520 at 390.728 kb on + strand, within BPHYT_RS21520 at 390.728 kb on + strand, within BPHYT_RS21520 at 390.764 kb on + strand at 390.818 kb on + strand at 390.820 kb on + strand at 391.243 kb on + strand at 391.243 kb on + strand at 391.244 kb on - strand at 391.244 kb on - strand at 391.252 kb on + strand at 391.252 kb on + strand at 391.299 kb on - strand at 391.912 kb on + strand, within BPHYT_RS21530 at 391.913 kb on - strand, within BPHYT_RS21530 at 392.361 kb on - strand, within BPHYT_RS21540 at 392.627 kb on + strand at 392.669 kb on - strand at 392.705 kb on + strand at 392.829 kb on + strand, within BPHYT_RS21545 at 392.964 kb on - strand, within BPHYT_RS21545
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.5 mM remove 390,563 + BPHYT_RS21520 0.73 -0.5 390,563 + BPHYT_RS21520 0.73 +0.0 390,563 + BPHYT_RS21520 0.73 +0.2 390,564 - BPHYT_RS21520 0.74 -0.1 390,575 + BPHYT_RS21520 0.74 +0.1 390,576 - BPHYT_RS21520 0.75 +0.1 390,584 + BPHYT_RS21520 0.75 -0.8 390,728 + BPHYT_RS21520 0.87 -0.1 390,728 + BPHYT_RS21520 0.87 -0.2 390,764 + -0.8 390,818 + +0.3 390,820 + -0.9 391,243 + -0.4 391,243 + -1.3 391,244 - -1.4 391,244 - -0.3 391,252 + -0.3 391,252 + -0.2 391,299 - +0.1 391,912 + BPHYT_RS21530 0.85 -0.4 391,913 - BPHYT_RS21530 0.85 -1.0 392,361 - BPHYT_RS21540 0.15 -0.3 392,627 + -0.6 392,669 - +0.2 392,705 + +0.6 392,829 + BPHYT_RS21545 0.17 -0.1 392,964 - BPHYT_RS21545 0.36 -0.1
Or see this region's nucleotide sequence