Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25250 and AO356_25255 overlap by 13 nucleotides AO356_25255 and AO356_25260 are separated by 22 nucleotides AO356_25260 and AO356_25265 are separated by 2 nucleotides
AO356_25250: AO356_25250 - hypothetical protein, at 5,716,101 to 5,717,468
_25250
AO356_25255: AO356_25255 - FTR1 family iron permease, at 5,717,456 to 5,718,310
_25255
AO356_25260: AO356_25260 - iron transporter, at 5,718,333 to 5,718,677
_25260
AO356_25265: AO356_25265 - hypothetical protein, at 5,718,680 to 5,719,210
_25265
Position (kb) 5717
5718
5719 Strain fitness (log2 ratio) -1
0
1
2 at 5716.905 kb on + strand, within AO356_25250 at 5717.071 kb on + strand, within AO356_25250 at 5717.254 kb on - strand, within AO356_25250 at 5717.371 kb on + strand at 5717.531 kb on + strand at 5717.623 kb on + strand, within AO356_25255 at 5717.623 kb on + strand, within AO356_25255 at 5717.656 kb on - strand, within AO356_25255 at 5717.656 kb on - strand, within AO356_25255 at 5718.155 kb on + strand, within AO356_25255 at 5718.195 kb on - strand, within AO356_25255 at 5718.195 kb on - strand, within AO356_25255 at 5718.195 kb on - strand, within AO356_25255 at 5718.292 kb on + strand at 5718.292 kb on + strand at 5718.293 kb on - strand at 5718.293 kb on - strand at 5718.587 kb on - strand, within AO356_25260 at 5718.831 kb on + strand, within AO356_25265 at 5718.831 kb on + strand, within AO356_25265 at 5718.832 kb on - strand, within AO356_25265 at 5718.832 kb on - strand, within AO356_25265 at 5718.832 kb on - strand, within AO356_25265 at 5718.960 kb on + strand, within AO356_25265 at 5718.960 kb on + strand, within AO356_25265 at 5718.960 kb on + strand, within AO356_25265 at 5719.092 kb on + strand, within AO356_25265 at 5719.092 kb on + strand, within AO356_25265 at 5719.093 kb on - strand, within AO356_25265 at 5719.093 kb on - strand, within AO356_25265 at 5719.248 kb on + strand at 5719.268 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 5,716,905 + AO356_25250 0.59 +1.2 5,717,071 + AO356_25250 0.71 +0.3 5,717,254 - AO356_25250 0.84 -0.3 5,717,371 + -0.5 5,717,531 + +0.1 5,717,623 + AO356_25255 0.20 +0.6 5,717,623 + AO356_25255 0.20 +0.2 5,717,656 - AO356_25255 0.23 -0.2 5,717,656 - AO356_25255 0.23 -0.8 5,718,155 + AO356_25255 0.82 -0.7 5,718,195 - AO356_25255 0.86 -0.4 5,718,195 - AO356_25255 0.86 +0.7 5,718,195 - AO356_25255 0.86 +0.1 5,718,292 + -0.6 5,718,292 + -0.9 5,718,293 - +1.8 5,718,293 - +0.6 5,718,587 - AO356_25260 0.74 -0.3 5,718,831 + AO356_25265 0.28 -0.1 5,718,831 + AO356_25265 0.28 +1.3 5,718,832 - AO356_25265 0.29 +0.1 5,718,832 - AO356_25265 0.29 -1.7 5,718,832 - AO356_25265 0.29 -0.4 5,718,960 + AO356_25265 0.53 +0.4 5,718,960 + AO356_25265 0.53 +0.1 5,718,960 + AO356_25265 0.53 -0.5 5,719,092 + AO356_25265 0.78 +0.5 5,719,092 + AO356_25265 0.78 -0.7 5,719,093 - AO356_25265 0.78 +1.3 5,719,093 - AO356_25265 0.78 +0.2 5,719,248 + +0.0 5,719,268 - +0.6
Or see this region's nucleotide sequence