Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02095 and AO356_02100 are separated by 11 nucleotides AO356_02100 and AO356_02105 are separated by 84 nucleotides AO356_02105 and AO356_02110 are separated by 29 nucleotides AO356_02110 and AO356_02115 overlap by 4 nucleotides AO356_02115 and AO356_02120 overlap by 4 nucleotides AO356_02120 and AO356_02125 are separated by 75 nucleotides
AO356_02095: AO356_02095 - hypothetical protein, at 458,292 to 458,636
_02095
AO356_02100: AO356_02100 - hypothetical protein, at 458,648 to 458,968
_02100
AO356_02105: AO356_02105 - hypothetical protein, at 459,053 to 459,265
_02105
AO356_02110: AO356_02110 - hypothetical protein, at 459,295 to 459,768
_02110
AO356_02115: AO356_02115 - transcriptional regulator, at 459,765 to 460,055
_02115
AO356_02120: AO356_02120 - hypothetical protein, at 460,052 to 460,423
_02120
AO356_02125: AO356_02125 - hypothetical protein, at 460,499 to 460,732
_02125
Position (kb) 459
460 Strain fitness (log2 ratio) -2
-1
0
1 at 458.338 kb on + strand, within AO356_02095 at 458.339 kb on - strand, within AO356_02095 at 458.429 kb on + strand, within AO356_02095 at 458.443 kb on + strand, within AO356_02095 at 458.443 kb on + strand, within AO356_02095 at 458.444 kb on - strand, within AO356_02095 at 458.520 kb on - strand, within AO356_02095 at 459.053 kb on - strand at 459.053 kb on - strand at 459.171 kb on - strand, within AO356_02105 at 459.171 kb on - strand, within AO356_02105 at 459.282 kb on - strand at 459.330 kb on - strand at 459.330 kb on - strand at 459.330 kb on - strand at 459.330 kb on - strand at 459.371 kb on - strand, within AO356_02110 at 459.412 kb on - strand, within AO356_02110 at 459.460 kb on - strand, within AO356_02110 at 459.460 kb on - strand, within AO356_02110 at 459.460 kb on - strand, within AO356_02110 at 459.460 kb on - strand, within AO356_02110 at 459.487 kb on - strand, within AO356_02110 at 459.487 kb on - strand, within AO356_02110 at 459.494 kb on - strand, within AO356_02110 at 459.506 kb on - strand, within AO356_02110 at 459.521 kb on - strand, within AO356_02110 at 459.521 kb on - strand, within AO356_02110 at 459.521 kb on - strand, within AO356_02110 at 459.521 kb on - strand, within AO356_02110 at 459.521 kb on - strand, within AO356_02110 at 459.521 kb on - strand, within AO356_02110 at 459.521 kb on - strand, within AO356_02110 at 459.521 kb on - strand, within AO356_02110 at 459.521 kb on - strand, within AO356_02110 at 459.521 kb on - strand, within AO356_02110 at 459.701 kb on - strand, within AO356_02110 at 459.701 kb on - strand, within AO356_02110 at 459.701 kb on - strand, within AO356_02110 at 459.729 kb on - strand at 459.980 kb on - strand, within AO356_02115 at 460.369 kb on - strand, within AO356_02120 at 460.433 kb on - strand at 460.639 kb on - strand, within AO356_02125 at 460.639 kb on - strand, within AO356_02125 at 460.706 kb on - strand, within AO356_02125
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 458,338 + AO356_02095 0.13 +0.1 458,339 - AO356_02095 0.14 +0.6 458,429 + AO356_02095 0.40 +0.2 458,443 + AO356_02095 0.44 +0.3 458,443 + AO356_02095 0.44 -0.2 458,444 - AO356_02095 0.44 +0.3 458,520 - AO356_02095 0.66 -0.4 459,053 - +0.5 459,053 - +0.3 459,171 - AO356_02105 0.55 -0.2 459,171 - AO356_02105 0.55 +0.3 459,282 - -0.9 459,330 - -0.3 459,330 - -0.3 459,330 - +0.6 459,330 - -0.3 459,371 - AO356_02110 0.16 -1.9 459,412 - AO356_02110 0.25 -0.7 459,460 - AO356_02110 0.35 +0.1 459,460 - AO356_02110 0.35 -0.5 459,460 - AO356_02110 0.35 -0.0 459,460 - AO356_02110 0.35 +1.7 459,487 - AO356_02110 0.41 +0.2 459,487 - AO356_02110 0.41 -1.0 459,494 - AO356_02110 0.42 -0.4 459,506 - AO356_02110 0.45 +0.3 459,521 - AO356_02110 0.48 -0.1 459,521 - AO356_02110 0.48 -0.8 459,521 - AO356_02110 0.48 -0.2 459,521 - AO356_02110 0.48 -0.5 459,521 - AO356_02110 0.48 -0.4 459,521 - AO356_02110 0.48 +0.3 459,521 - AO356_02110 0.48 +0.8 459,521 - AO356_02110 0.48 +0.5 459,521 - AO356_02110 0.48 -0.1 459,521 - AO356_02110 0.48 -1.1 459,701 - AO356_02110 0.86 -0.3 459,701 - AO356_02110 0.86 +0.3 459,701 - AO356_02110 0.86 -0.7 459,729 - -0.7 459,980 - AO356_02115 0.74 -0.6 460,369 - AO356_02120 0.85 -0.6 460,433 - +0.7 460,639 - AO356_02125 0.60 +0.4 460,639 - AO356_02125 0.60 -0.2 460,706 - AO356_02125 0.88 +0.4
Or see this region's nucleotide sequence