Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003192

Experiment: Tween 20 (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tween 20 (C)
3,612,537	+		ABIE53_003190	0.26	-0.3
3,612,537	+		ABIE53_003190	0.26	-0.6
3,612,537	+		ABIE53_003190	0.26	-0.0
3,612,538	-		ABIE53_003190	0.26	+1.0
3,612,573	+		ABIE53_003190	0.31	-0.0
3,612,573	+		ABIE53_003190	0.31	-1.2
3,612,573	+		ABIE53_003190	0.31	+0.5
3,612,573	+		ABIE53_003190	0.31	-2.1
3,612,573	+		ABIE53_003190	0.31	-0.8
3,612,573	+		ABIE53_003190	0.31	+0.2
3,612,573	+		ABIE53_003190	0.31	-0.3
3,612,573	+		ABIE53_003190	0.31	-0.8
3,612,574	-		ABIE53_003190	0.31	-0.3
3,612,574	-		ABIE53_003190	0.31	-1.3
3,612,574	-		ABIE53_003190	0.31	-0.2
3,612,574	-		ABIE53_003190	0.31	+0.4
3,612,574	-		ABIE53_003190	0.31	+1.3
3,612,574	-		ABIE53_003190	0.31	-0.0
3,612,576	+		ABIE53_003190	0.32	+0.4
3,612,576	+		ABIE53_003190	0.32	+3.0
3,612,615	+		ABIE53_003190	0.38	-0.6
3,612,616	-		ABIE53_003190	0.38	-0.6
3,612,616	-		ABIE53_003190	0.38	+1.8
3,612,633	+		ABIE53_003190	0.41	+0.1
3,612,634	-		ABIE53_003190	0.41	-1.6
3,612,634	-		ABIE53_003190	0.41	+3.0
3,612,634	-		ABIE53_003190	0.41	-0.8
3,612,634	-		ABIE53_003190	0.41	-0.2
3,612,699	-		ABIE53_003190	0.51	+0.7
3,612,811	+		ABIE53_003190	0.68	-1.5
3,612,811	+		ABIE53_003190	0.68	-1.2
3,612,811	+		ABIE53_003190	0.68	+2.1
3,612,812	-		ABIE53_003190	0.68	+1.3
3,612,867	+		ABIE53_003190	0.76	-0.3
3,612,867	+		ABIE53_003190	0.76	+1.0
3,612,868	-		ABIE53_003190	0.77	-0.0
3,613,009	+				+0.2
3,613,009	+				-1.5
3,613,009	+				-0.6
3,613,009	+				+0.7
3,613,010	-				-1.7
3,613,010	-				+0.2
3,613,015	+				-0.6
3,613,015	+				+1.4
3,613,015	+				+0.3
3,613,015	+				+0.0
3,613,015	+				-1.2
3,613,015	+				-1.2
3,613,016	-				-0.2
3,613,016	-				-1.3
3,613,016	-				-1.0
3,613,016	-				-1.8
3,613,016	-				+0.4
3,613,016	-				+2.0
3,613,176	+		ABIE53_003191	0.45	+2.6
3,613,176	+		ABIE53_003191	0.45	-1.9
3,613,176	+		ABIE53_003191	0.45	+1.0
3,613,176	+		ABIE53_003191	0.45	+2.3
3,613,176	+		ABIE53_003191	0.45	-0.3
3,613,176	+		ABIE53_003191	0.45	+0.7
3,613,177	-		ABIE53_003191	0.45	+1.1
3,613,177	-		ABIE53_003191	0.45	-3.9
3,613,177	-		ABIE53_003191	0.45	-2.3
3,613,177	-		ABIE53_003191	0.45	-0.6
3,613,249	+		ABIE53_003191	0.61	+3.8
3,613,250	-		ABIE53_003191	0.62	-0.5
3,613,265	-		ABIE53_003191	0.65	-0.7
3,613,265	-		ABIE53_003191	0.65	-2.1
3,613,265	-		ABIE53_003191	0.65	+1.0
3,613,309	+		ABIE53_003191	0.75	-0.8
3,613,310	-		ABIE53_003191	0.75	+0.1
3,613,310	-		ABIE53_003191	0.75	+0.2
3,613,390	+				+1.2
3,613,424	+				+0.8
3,613,424	+				-0.6
3,613,424	+				-0.6
3,613,425	-				+1.0
3,613,425	-				-1.6
3,613,425	-				-0.7
3,613,435	+				+3.3
3,613,436	-				+0.2
3,613,457	+				+0.3
3,613,457	+				-0.3
3,613,457	+				+0.2
3,613,457	+				+3.2
3,613,457	+				-1.0
3,613,458	-				-2.2
3,613,458	-				-0.3
3,613,501	+				+0.7
3,613,501	+				-0.0
3,613,502	-				+0.1
3,613,502	-				-2.4
3,613,502	-				-0.9
3,613,502	-				-0.3
3,613,502	-				-2.0
3,613,502	-				-0.6
3,613,682	+		ABIE53_003192	0.16	-0.0
3,613,683	-		ABIE53_003192	0.16	-0.2
3,613,839	-		ABIE53_003192	0.27	-1.4
3,613,839	-		ABIE53_003192	0.27	+0.8
3,613,946	+		ABIE53_003192	0.34	-2.7
3,613,946	+		ABIE53_003192	0.34	-1.2
3,613,946	+		ABIE53_003192	0.34	+0.4
3,613,947	-		ABIE53_003192	0.34	-1.4
3,613,960	+		ABIE53_003192	0.35	-0.2
3,613,960	+		ABIE53_003192	0.35	-1.7
3,613,960	+		ABIE53_003192	0.35	+0.4
3,613,960	+		ABIE53_003192	0.35	-0.0
3,613,960	+		ABIE53_003192	0.35	+1.0
3,613,961	-		ABIE53_003192	0.35	-1.0
3,613,961	-		ABIE53_003192	0.35	-0.3
3,614,135	+		ABIE53_003192	0.47	-1.6
3,614,135	+		ABIE53_003192	0.47	-0.3
3,614,135	+		ABIE53_003192	0.47	-0.3
3,614,135	+		ABIE53_003192	0.47	-1.8
3,614,135	+		ABIE53_003192	0.47	-0.0
3,614,135	+		ABIE53_003192	0.47	+1.0
3,614,135	+		ABIE53_003192	0.47	+2.0
3,614,135	+		ABIE53_003192	0.47	-1.0
3,614,135	+		ABIE53_003192	0.47	-1.0
3,614,135	+		ABIE53_003192	0.47	+0.8
3,614,136	-		ABIE53_003192	0.47	+1.8
3,614,136	-		ABIE53_003192	0.47	+0.3
3,614,136	-		ABIE53_003192	0.47	-0.9
3,614,136	-		ABIE53_003192	0.47	-1.0
3,614,136	-		ABIE53_003192	0.47	-0.7
3,614,136	-		ABIE53_003192	0.47	-0.5
3,614,136	-		ABIE53_003192	0.47	+0.9
3,614,136	-		ABIE53_003192	0.47	+1.0
3,614,136	-		ABIE53_003192	0.47	+2.1
3,614,136	-		ABIE53_003192	0.47	+0.7
3,614,136	-		ABIE53_003192	0.47	+2.6
3,614,136	-		ABIE53_003192	0.47	-1.1
3,614,272	+		ABIE53_003192	0.57	+1.0
3,614,272	+		ABIE53_003192	0.57	-0.6
3,614,297	+		ABIE53_003192	0.58	+0.8
3,614,297	+		ABIE53_003192	0.58	-0.0
3,614,297	+		ABIE53_003192	0.58	+0.6
3,614,297	+		ABIE53_003192	0.58	-1.3
3,614,297	+		ABIE53_003192	0.58	-0.0
3,614,298	-		ABIE53_003192	0.58	+0.9
3,614,298	-		ABIE53_003192	0.58	+1.7
3,614,309	+		ABIE53_003192	0.59	+1.0
3,614,309	+		ABIE53_003192	0.59	+1.1
3,614,309	+		ABIE53_003192	0.59	+0.3
3,614,309	+		ABIE53_003192	0.59	-0.8
3,614,309	+		ABIE53_003192	0.59	-0.8
3,614,309	+		ABIE53_003192	0.59	+1.0
3,614,310	-		ABIE53_003192	0.59	+0.3
3,614,310	-		ABIE53_003192	0.59	-1.4
3,614,319	-		ABIE53_003192	0.60	+4.3
3,614,346	-		ABIE53_003192	0.62	+0.4
3,614,346	-		ABIE53_003192	0.62	+4.6
3,614,346	-		ABIE53_003192	0.62	-0.6
3,614,346	-		ABIE53_003192	0.62	+0.7
3,614,452	-		ABIE53_003192	0.69	+0.4
3,614,607	-		ABIE53_003192	0.80	-2.3
3,614,607	-		ABIE53_003192	0.80	-1.6
3,614,607	-		ABIE53_003192	0.80	-0.0
3,614,801	+				-1.2
3,614,802	-				+1.0
3,614,802	-				-0.8
3,614,810	+				+2.0
3,614,810	+				-0.0
3,614,810	+				-1.8
3,614,810	+				+1.4
3,614,811	-				-1.6
3,614,811	-				+2.6
3,614,911	+				+0.4
3,614,911	+				-1.9
3,614,911	+				+1.4
3,614,911	+				-1.6
3,614,911	+				-0.6
3,614,912	-				-0.1
3,614,912	-				-0.4
3,614,912	-				-0.6
3,614,916	+				-0.0
3,614,917	-				+0.7
3,614,917	-				-1.2
3,614,924	-				+0.8
3,614,991	+				-0.3
3,614,992	-				-0.8
3,615,098	-		ABIE53_003193	0.13	+0.0
3,615,098	-		ABIE53_003193	0.13	-0.5
3,615,099	+		ABIE53_003193	0.13	+0.4
3,615,099	+		ABIE53_003193	0.13	-1.0
3,615,099	+		ABIE53_003193	0.13	-1.1
3,615,099	+		ABIE53_003193	0.13	+0.6
3,615,099	+		ABIE53_003193	0.13	-0.4
3,615,100	-		ABIE53_003193	0.13	-1.0
3,615,157	-		ABIE53_003193	0.18	-1.3
3,615,554	+		ABIE53_003193	0.50	-0.0
3,615,554	+		ABIE53_003193	0.50	-1.2
3,615,554	+		ABIE53_003193	0.50	-0.5
3,615,554	+		ABIE53_003193	0.50	+1.0
3,615,554	+		ABIE53_003193	0.50	-2.1
3,615,554	+		ABIE53_003193	0.50	+0.2
3,615,555	-		ABIE53_003193	0.50	+2.3
3,615,555	-		ABIE53_003193	0.50	-0.4
3,615,555	-		ABIE53_003193	0.50	-0.8
3,615,594	+		ABIE53_003193	0.53	+1.0
3,615,595	-		ABIE53_003193	0.53	-1.9
3,615,595	-		ABIE53_003193	0.53	-0.8
3,615,654	-		ABIE53_003193	0.58	-0.8
3,615,714	+		ABIE53_003193	0.63	+2.1
3,615,715	-		ABIE53_003193	0.63	-2.3
3,615,715	-		ABIE53_003193	0.63	-1.0
3,615,715	-		ABIE53_003193	0.63	-0.6
3,615,767	-		ABIE53_003193	0.67	-1.3
3,615,767	-		ABIE53_003193	0.67	-0.5
3,615,767	-		ABIE53_003193	0.67	-0.9
3,615,864	+		ABIE53_003193	0.75	-1.7
3,615,865	-		ABIE53_003193	0.75	+1.5
3,615,865	-		ABIE53_003193	0.75	-0.2