Experiment: D-Tagatose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03040 and SMc03041 are separated by 355 nucleotides SMc03041 and SMc03042 overlap by 4 nucleotides SMc03042 and SMc03043 are separated by 3 nucleotides
SMc03040: SMc03040 - flagellin protein, at 735,785 to 736,750
SMc03040
SMc03041: SMc03041 - hypothetical protein, at 737,106 to 737,753
SMc03041
SMc03042: SMc03042 - flagellar motor protein MotB, at 737,750 to 738,934
SMc03042
SMc03043: SMc03043 - chemotaxis protein, at 738,938 to 740,242
SMc03043
Position (kb) 737
738
739 Strain fitness (log2 ratio) -2
-1
0
1
2 at 736.859 kb on - strand at 736.877 kb on + strand at 736.877 kb on + strand at 736.878 kb on - strand at 736.975 kb on + strand at 737.023 kb on - strand at 737.128 kb on - strand at 737.182 kb on - strand, within SMc03041 at 737.580 kb on - strand, within SMc03041 at 737.729 kb on + strand at 738.129 kb on - strand, within SMc03042 at 738.276 kb on - strand, within SMc03042 at 738.276 kb on - strand, within SMc03042 at 738.409 kb on + strand, within SMc03042 at 738.715 kb on + strand, within SMc03042 at 738.746 kb on + strand, within SMc03042 at 738.789 kb on - strand, within SMc03042 at 738.789 kb on - strand, within SMc03042 at 738.791 kb on + strand, within SMc03042 at 738.791 kb on + strand, within SMc03042 at 738.791 kb on + strand, within SMc03042 at 738.792 kb on - strand, within SMc03042 at 738.881 kb on + strand at 738.881 kb on + strand at 739.037 kb on + strand at 739.038 kb on - strand at 739.047 kb on + strand at 739.047 kb on + strand at 739.047 kb on + strand at 739.048 kb on - strand at 739.061 kb on + strand at 739.061 kb on + strand at 739.061 kb on + strand at 739.061 kb on + strand at 739.202 kb on + strand, within SMc03043 at 739.203 kb on - strand, within SMc03043 at 739.203 kb on - strand, within SMc03043 at 739.203 kb on - strand, within SMc03043 at 739.203 kb on - strand, within SMc03043 at 739.241 kb on - strand, within SMc03043 at 739.358 kb on + strand, within SMc03043 at 739.359 kb on - strand, within SMc03043 at 739.382 kb on + strand, within SMc03043 at 739.383 kb on - strand, within SMc03043 at 739.383 kb on - strand, within SMc03043 at 739.446 kb on - strand, within SMc03043 at 739.480 kb on - strand, within SMc03043 at 739.553 kb on + strand, within SMc03043 at 739.675 kb on - strand, within SMc03043 at 739.675 kb on - strand, within SMc03043 at 739.712 kb on + strand, within SMc03043 at 739.712 kb on + strand, within SMc03043 at 739.713 kb on - strand, within SMc03043 at 739.835 kb on + strand, within SMc03043
Per-strain Table
Position Strand Gene LocusTag Fraction D-Tagatose (C) remove 736,859 - +0.2 736,877 + +1.0 736,877 + -0.0 736,878 - +0.5 736,975 + +0.1 737,023 - -0.3 737,128 - -0.7 737,182 - SMc03041 0.12 -0.2 737,580 - SMc03041 0.73 -2.1 737,729 + -0.0 738,129 - SMc03042 0.32 +1.2 738,276 - SMc03042 0.44 -0.6 738,276 - SMc03042 0.44 +0.7 738,409 + SMc03042 0.56 +1.0 738,715 + SMc03042 0.81 -0.1 738,746 + SMc03042 0.84 +0.1 738,789 - SMc03042 0.88 +0.5 738,789 - SMc03042 0.88 -0.1 738,791 + SMc03042 0.88 -0.0 738,791 + SMc03042 0.88 +0.6 738,791 + SMc03042 0.88 +1.6 738,792 - SMc03042 0.88 -0.3 738,881 + -0.0 738,881 + -0.2 739,037 + +0.1 739,038 - +0.0 739,047 + +0.9 739,047 + -0.4 739,047 + -0.4 739,048 - -0.2 739,061 + +0.1 739,061 + -0.1 739,061 + +0.3 739,061 + +0.0 739,202 + SMc03043 0.20 +0.4 739,203 - SMc03043 0.20 -0.2 739,203 - SMc03043 0.20 +0.0 739,203 - SMc03043 0.20 +0.2 739,203 - SMc03043 0.20 -1.5 739,241 - SMc03043 0.23 -0.7 739,358 + SMc03043 0.32 +1.5 739,359 - SMc03043 0.32 -0.4 739,382 + SMc03043 0.34 -0.4 739,383 - SMc03043 0.34 +0.5 739,383 - SMc03043 0.34 +0.9 739,446 - SMc03043 0.39 +2.5 739,480 - SMc03043 0.42 -0.5 739,553 + SMc03043 0.47 +0.3 739,675 - SMc03043 0.56 -0.0 739,675 - SMc03043 0.56 -0.6 739,712 + SMc03043 0.59 -0.8 739,712 + SMc03043 0.59 -0.3 739,713 - SMc03043 0.59 +0.7 739,835 + SMc03043 0.69 -0.7
Or see this region's nucleotide sequence