Experiment: D-Tagatose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03036 and SMc03037 are separated by 270 nucleotides SMc03037 and SMc03038 are separated by 342 nucleotides
SMc03036: SMc03036 - flagellar biosynthesis protein FliP, at 730,277 to 731,014
SMc03036
SMc03037: SMc03037 - flagellin A, at 731,285 to 732,469
SMc03037
SMc03038: SMc03038 - flagellin B protein, at 732,812 to 733,996
SMc03038
Position (kb) 731
732
733 Strain fitness (log2 ratio) -1
0
1 at 730.300 kb on - strand at 730.531 kb on + strand, within SMc03036 at 730.532 kb on - strand, within SMc03036 at 730.532 kb on - strand, within SMc03036 at 730.568 kb on + strand, within SMc03036 at 730.568 kb on + strand, within SMc03036 at 730.568 kb on + strand, within SMc03036 at 730.568 kb on + strand, within SMc03036 at 730.569 kb on - strand, within SMc03036 at 730.569 kb on - strand, within SMc03036 at 730.569 kb on - strand, within SMc03036 at 730.569 kb on - strand, within SMc03036 at 730.569 kb on - strand, within SMc03036 at 731.247 kb on + strand at 731.284 kb on + strand at 731.330 kb on - strand at 731.780 kb on + strand, within SMc03037 at 731.780 kb on + strand, within SMc03037 at 731.780 kb on + strand, within SMc03037 at 731.781 kb on - strand, within SMc03037 at 731.847 kb on - strand, within SMc03037 at 732.598 kb on + strand at 732.598 kb on + strand at 732.670 kb on - strand at 732.684 kb on + strand at 732.786 kb on + strand at 732.866 kb on - strand at 732.948 kb on - strand, within SMc03038 at 732.982 kb on + strand, within SMc03038 at 732.983 kb on - strand, within SMc03038 at 733.307 kb on + strand, within SMc03038 at 733.315 kb on + strand, within SMc03038 at 733.315 kb on + strand, within SMc03038 at 733.374 kb on - strand, within SMc03038 at 733.374 kb on - strand, within SMc03038
Per-strain Table
Position Strand Gene LocusTag Fraction D-Tagatose (C) remove 730,300 - -0.8 730,531 + SMc03036 0.34 +0.6 730,532 - SMc03036 0.35 -0.1 730,532 - SMc03036 0.35 +0.4 730,568 + SMc03036 0.39 +0.0 730,568 + SMc03036 0.39 +0.4 730,568 + SMc03036 0.39 -1.7 730,568 + SMc03036 0.39 -0.1 730,569 - SMc03036 0.40 +0.2 730,569 - SMc03036 0.40 -0.6 730,569 - SMc03036 0.40 -0.4 730,569 - SMc03036 0.40 -0.2 730,569 - SMc03036 0.40 -0.1 731,247 + -0.2 731,284 + +0.5 731,330 - +0.0 731,780 + SMc03037 0.42 +0.4 731,780 + SMc03037 0.42 -0.6 731,780 + SMc03037 0.42 +0.7 731,781 - SMc03037 0.42 +0.8 731,847 - SMc03037 0.47 +0.1 732,598 + +0.4 732,598 + -0.2 732,670 - -0.6 732,684 + -0.3 732,786 + -1.0 732,866 - -0.3 732,948 - SMc03038 0.11 +0.3 732,982 + SMc03038 0.14 +0.3 732,983 - SMc03038 0.14 -0.0 733,307 + SMc03038 0.42 -0.3 733,315 + SMc03038 0.42 -0.4 733,315 + SMc03038 0.42 -0.2 733,374 - SMc03038 0.47 -0.2 733,374 - SMc03038 0.47 -0.0
Or see this region's nucleotide sequence