Experiment: D-Tagatose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02690 and SMc02691 are separated by 273 nucleotides SMc02691 and SMc02692 are separated by 167 nucleotides
SMc02690: SMc02690 - hypothetical protein, at 2,539,659 to 2,540,615
SMc02690
SMc02691: SMc02691 - membrane transporter, at 2,540,889 to 2,542,121
SMc02691
SMc02692: SMc02692 - 50S ribosomal protein L25, at 2,542,289 to 2,542,903
SMc02692
Position (kb)
2540
2541
2542
2543 Strain fitness (log2 ratio)
-2
-1
0
1 at 2540.097 kb on + strand, within SMc02690 at 2540.098 kb on - strand, within SMc02690 at 2540.160 kb on - strand, within SMc02690 at 2540.348 kb on + strand, within SMc02690 at 2540.348 kb on + strand, within SMc02690 at 2540.581 kb on + strand at 2540.582 kb on - strand at 2540.764 kb on + strand at 2540.765 kb on - strand at 2540.778 kb on - strand at 2540.782 kb on - strand at 2540.782 kb on - strand at 2540.782 kb on - strand at 2540.782 kb on - strand at 2540.783 kb on + strand at 2540.783 kb on + strand at 2540.784 kb on - strand at 2540.784 kb on - strand at 2540.784 kb on - strand at 2540.817 kb on - strand at 2540.858 kb on - strand at 2540.893 kb on + strand at 2540.894 kb on - strand at 2540.894 kb on - strand at 2540.894 kb on - strand at 2540.894 kb on - strand at 2540.894 kb on - strand at 2540.905 kb on + strand at 2540.906 kb on - strand at 2541.442 kb on - strand, within SMc02691 at 2541.493 kb on + strand, within SMc02691 at 2541.493 kb on + strand, within SMc02691 at 2541.494 kb on - strand, within SMc02691 at 2541.666 kb on + strand, within SMc02691 at 2541.667 kb on - strand, within SMc02691 at 2541.667 kb on - strand, within SMc02691 at 2541.844 kb on - strand, within SMc02691 at 2541.844 kb on - strand, within SMc02691 at 2542.112 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Tagatose (C) remove 2,540,097 + SMc02690 0.46 -0.2 2,540,098 - SMc02690 0.46 +0.3 2,540,160 - SMc02690 0.52 -1.0 2,540,348 + SMc02690 0.72 -0.4 2,540,348 + SMc02690 0.72 -0.4 2,540,581 + -0.5 2,540,582 - -0.5 2,540,764 + -0.6 2,540,765 - +0.7 2,540,778 - +0.2 2,540,782 - +0.3 2,540,782 - +0.2 2,540,782 - -1.8 2,540,782 - +1.3 2,540,783 + -1.3 2,540,783 + -0.0 2,540,784 - +0.8 2,540,784 - +0.4 2,540,784 - -0.1 2,540,817 - -0.4 2,540,858 - -0.3 2,540,893 + -0.1 2,540,894 - +0.1 2,540,894 - -0.7 2,540,894 - +0.0 2,540,894 - +0.3 2,540,894 - -0.0 2,540,905 + -0.1 2,540,906 - +0.2 2,541,442 - SMc02691 0.45 +0.7 2,541,493 + SMc02691 0.49 +0.1 2,541,493 + SMc02691 0.49 -0.2 2,541,494 - SMc02691 0.49 +0.4 2,541,666 + SMc02691 0.63 +0.8 2,541,667 - SMc02691 0.63 -0.0 2,541,667 - SMc02691 0.63 +1.0 2,541,844 - SMc02691 0.77 +0.2 2,541,844 - SMc02691 0.77 +0.4 2,542,112 + +0.2
Or see this region's nucleotide sequence