Experiment: D-Tagatose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20354 and SM_b20355 are separated by 122 nucleotides SM_b20355 and SM_b20356 overlap by 4 nucleotides
SM_b20354: SM_b20354 - hypothetical protein, at 361,863 to 363,782
_b20354
SM_b20355: SM_b20355 - hypothetical protein, at 363,905 to 364,663
_b20355
SM_b20356: SM_b20356 - sensory histidine kinase, at 364,660 to 367,413
_b20356
Position (kb) 363
364
365 Strain fitness (log2 ratio) -2
-1
0
1
2 at 362.994 kb on + strand, within SM_b20354 at 362.995 kb on - strand, within SM_b20354 at 362.995 kb on - strand, within SM_b20354 at 363.051 kb on + strand, within SM_b20354 at 363.052 kb on - strand, within SM_b20354 at 363.072 kb on - strand, within SM_b20354 at 363.100 kb on - strand, within SM_b20354 at 363.100 kb on - strand, within SM_b20354 at 363.219 kb on + strand, within SM_b20354 at 363.329 kb on + strand, within SM_b20354 at 363.330 kb on - strand, within SM_b20354 at 363.364 kb on - strand, within SM_b20354 at 363.364 kb on - strand, within SM_b20354 at 363.364 kb on - strand, within SM_b20354 at 363.398 kb on - strand, within SM_b20354 at 363.398 kb on - strand, within SM_b20354 at 363.398 kb on - strand, within SM_b20354 at 363.398 kb on - strand, within SM_b20354 at 363.660 kb on - strand at 363.660 kb on - strand at 363.867 kb on - strand at 364.065 kb on - strand, within SM_b20355 at 364.263 kb on + strand, within SM_b20355 at 364.263 kb on + strand, within SM_b20355 at 364.264 kb on - strand, within SM_b20355 at 364.478 kb on + strand, within SM_b20355 at 364.479 kb on - strand, within SM_b20355 at 364.479 kb on - strand, within SM_b20355 at 364.479 kb on - strand, within SM_b20355 at 364.535 kb on + strand, within SM_b20355 at 364.539 kb on - strand, within SM_b20355 at 364.918 kb on + strand at 364.918 kb on + strand at 365.050 kb on - strand, within SM_b20356 at 365.065 kb on + strand, within SM_b20356 at 365.065 kb on + strand, within SM_b20356 at 365.065 kb on + strand, within SM_b20356 at 365.098 kb on + strand, within SM_b20356 at 365.124 kb on + strand, within SM_b20356 at 365.199 kb on - strand, within SM_b20356 at 365.529 kb on - strand, within SM_b20356 at 365.557 kb on + strand, within SM_b20356 at 365.557 kb on + strand, within SM_b20356 at 365.596 kb on + strand, within SM_b20356 at 365.596 kb on + strand, within SM_b20356 at 365.596 kb on + strand, within SM_b20356 at 365.629 kb on - strand, within SM_b20356
Per-strain Table
Position Strand Gene LocusTag Fraction D-Tagatose (C) remove 362,994 + SM_b20354 0.59 +0.2 362,995 - SM_b20354 0.59 -0.6 362,995 - SM_b20354 0.59 -0.2 363,051 + SM_b20354 0.62 -0.4 363,052 - SM_b20354 0.62 -0.8 363,072 - SM_b20354 0.63 -0.4 363,100 - SM_b20354 0.64 +2.0 363,100 - SM_b20354 0.64 +0.4 363,219 + SM_b20354 0.71 +0.3 363,329 + SM_b20354 0.76 +0.4 363,330 - SM_b20354 0.76 +1.0 363,364 - SM_b20354 0.78 -0.4 363,364 - SM_b20354 0.78 +0.6 363,364 - SM_b20354 0.78 +0.3 363,398 - SM_b20354 0.80 +0.0 363,398 - SM_b20354 0.80 +0.0 363,398 - SM_b20354 0.80 -0.3 363,398 - SM_b20354 0.80 -0.7 363,660 - +0.4 363,660 - +0.1 363,867 - -0.1 364,065 - SM_b20355 0.21 +0.4 364,263 + SM_b20355 0.47 -0.0 364,263 + SM_b20355 0.47 -0.4 364,264 - SM_b20355 0.47 -1.9 364,478 + SM_b20355 0.75 -0.1 364,479 - SM_b20355 0.76 +1.0 364,479 - SM_b20355 0.76 +0.2 364,479 - SM_b20355 0.76 +0.6 364,535 + SM_b20355 0.83 +1.5 364,539 - SM_b20355 0.84 +0.3 364,918 + -0.5 364,918 + +0.4 365,050 - SM_b20356 0.14 +0.7 365,065 + SM_b20356 0.15 -0.2 365,065 + SM_b20356 0.15 +0.1 365,065 + SM_b20356 0.15 +0.0 365,098 + SM_b20356 0.16 -0.0 365,124 + SM_b20356 0.17 -0.5 365,199 - SM_b20356 0.20 +0.1 365,529 - SM_b20356 0.32 +0.3 365,557 + SM_b20356 0.33 +0.3 365,557 + SM_b20356 0.33 -0.3 365,596 + SM_b20356 0.34 -0.4 365,596 + SM_b20356 0.34 +0.1 365,596 + SM_b20356 0.34 -0.2 365,629 - SM_b20356 0.35 +0.0
Or see this region's nucleotide sequence