Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2543 and Pf6N2E2_2544 are separated by 79 nucleotides Pf6N2E2_2544 and Pf6N2E2_2545 are separated by 181 nucleotides Pf6N2E2_2545 and Pf6N2E2_2546 overlap by 12 nucleotides Pf6N2E2_2546 and Pf6N2E2_2547 are separated by 151 nucleotides
Pf6N2E2_2543 - Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30), at 3,004,342 to 3,006,087
_2543
Pf6N2E2_2544 - Deblocking aminopeptidase (EC 3.4.11.-) @ Cyanophycinase 2 (EC 3.4.15.6), at 3,006,167 to 3,007,357
_2544
Pf6N2E2_2545 - FIG00953242: hypothetical protein, at 3,007,539 to 3,007,766
_2545
Pf6N2E2_2546 - Carbon storage regulator, at 3,007,755 to 3,007,955
_2546
Pf6N2E2_2547 - Protein of unknown function UPF0060, at 3,008,107 to 3,008,484
_2547
Position (kb)
3006
3007
3008 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3005.213 kb on + strand, within Pf6N2E2_2543 at 3005.214 kb on - strand, within Pf6N2E2_2543 at 3005.214 kb on - strand, within Pf6N2E2_2543 at 3005.214 kb on - strand, within Pf6N2E2_2543 at 3005.214 kb on - strand, within Pf6N2E2_2543 at 3005.219 kb on + strand, within Pf6N2E2_2543 at 3005.220 kb on - strand, within Pf6N2E2_2543 at 3005.727 kb on + strand, within Pf6N2E2_2543 at 3005.727 kb on + strand, within Pf6N2E2_2543 at 3005.782 kb on + strand, within Pf6N2E2_2543 at 3005.977 kb on + strand at 3005.978 kb on - strand at 3006.086 kb on - strand at 3006.145 kb on + strand at 3006.145 kb on + strand at 3006.145 kb on + strand at 3006.145 kb on + strand at 3006.145 kb on + strand at 3006.145 kb on + strand at 3006.146 kb on - strand at 3006.146 kb on - strand at 3006.146 kb on - strand at 3006.146 kb on - strand at 3006.146 kb on - strand at 3006.146 kb on - strand at 3006.146 kb on - strand at 3006.201 kb on - strand at 3006.201 kb on - strand at 3006.272 kb on + strand at 3006.272 kb on + strand at 3006.273 kb on - strand at 3006.623 kb on + strand, within Pf6N2E2_2544 at 3006.674 kb on + strand, within Pf6N2E2_2544 at 3006.674 kb on + strand, within Pf6N2E2_2544 at 3006.675 kb on - strand, within Pf6N2E2_2544 at 3006.675 kb on - strand, within Pf6N2E2_2544 at 3006.675 kb on - strand, within Pf6N2E2_2544 at 3006.830 kb on - strand, within Pf6N2E2_2544 at 3006.981 kb on - strand, within Pf6N2E2_2544 at 3007.058 kb on + strand, within Pf6N2E2_2544 at 3007.059 kb on - strand, within Pf6N2E2_2544 at 3007.061 kb on + strand, within Pf6N2E2_2544 at 3007.062 kb on - strand, within Pf6N2E2_2544 at 3007.062 kb on - strand, within Pf6N2E2_2544 at 3007.202 kb on + strand, within Pf6N2E2_2544 at 3007.202 kb on + strand, within Pf6N2E2_2544 at 3007.202 kb on + strand, within Pf6N2E2_2544 at 3007.203 kb on - strand, within Pf6N2E2_2544 at 3007.203 kb on - strand, within Pf6N2E2_2544 at 3007.203 kb on - strand, within Pf6N2E2_2544 at 3007.203 kb on - strand, within Pf6N2E2_2544 at 3007.517 kb on + strand at 3007.518 kb on - strand at 3007.518 kb on - strand at 3007.518 kb on - strand at 3007.518 kb on - strand at 3007.756 kb on + strand at 3007.757 kb on - strand at 3007.813 kb on + strand, within Pf6N2E2_2546 at 3007.813 kb on + strand, within Pf6N2E2_2546 at 3007.813 kb on + strand, within Pf6N2E2_2546 at 3007.904 kb on + strand, within Pf6N2E2_2546 at 3007.904 kb on + strand, within Pf6N2E2_2546 at 3007.932 kb on + strand, within Pf6N2E2_2546 at 3007.932 kb on + strand, within Pf6N2E2_2546 at 3007.947 kb on + strand at 3007.947 kb on + strand at 3007.947 kb on + strand at 3007.947 kb on + strand at 3007.947 kb on + strand at 3007.948 kb on - strand at 3007.948 kb on - strand at 3007.948 kb on - strand at 3008.044 kb on - strand at 3008.044 kb on - strand at 3008.104 kb on - strand at 3008.104 kb on - strand at 3008.238 kb on + strand, within Pf6N2E2_2547 at 3008.238 kb on + strand, within Pf6N2E2_2547 at 3008.238 kb on + strand, within Pf6N2E2_2547 at 3008.238 kb on + strand, within Pf6N2E2_2547 at 3008.238 kb on + strand, within Pf6N2E2_2547 at 3008.238 kb on + strand, within Pf6N2E2_2547 at 3008.239 kb on - strand, within Pf6N2E2_2547 at 3008.239 kb on - strand, within Pf6N2E2_2547 at 3008.240 kb on + strand, within Pf6N2E2_2547 at 3008.240 kb on + strand, within Pf6N2E2_2547 at 3008.240 kb on + strand, within Pf6N2E2_2547 at 3008.240 kb on + strand, within Pf6N2E2_2547 at 3008.240 kb on + strand, within Pf6N2E2_2547 at 3008.240 kb on + strand, within Pf6N2E2_2547 at 3008.240 kb on + strand, within Pf6N2E2_2547 at 3008.240 kb on + strand, within Pf6N2E2_2547 at 3008.240 kb on + strand, within Pf6N2E2_2547 at 3008.240 kb on + strand, within Pf6N2E2_2547 at 3008.241 kb on - strand, within Pf6N2E2_2547 at 3008.241 kb on - strand, within Pf6N2E2_2547 at 3008.241 kb on - strand, within Pf6N2E2_2547 at 3008.241 kb on - strand, within Pf6N2E2_2547 at 3008.253 kb on - strand, within Pf6N2E2_2547 at 3008.261 kb on + strand, within Pf6N2E2_2547 at 3008.276 kb on + strand, within Pf6N2E2_2547 at 3008.276 kb on + strand, within Pf6N2E2_2547 at 3008.277 kb on - strand, within Pf6N2E2_2547
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 3,005,213 + Pf6N2E2_2543 0.50 +0.0 3,005,214 - Pf6N2E2_2543 0.50 +0.3 3,005,214 - Pf6N2E2_2543 0.50 +0.2 3,005,214 - Pf6N2E2_2543 0.50 -0.5 3,005,214 - Pf6N2E2_2543 0.50 +0.0 3,005,219 + Pf6N2E2_2543 0.50 +1.0 3,005,220 - Pf6N2E2_2543 0.50 +0.4 3,005,727 + Pf6N2E2_2543 0.79 +0.8 3,005,727 + Pf6N2E2_2543 0.79 +0.0 3,005,782 + Pf6N2E2_2543 0.82 -0.2 3,005,977 + -1.0 3,005,978 - +0.1 3,006,086 - +0.1 3,006,145 + -0.2 3,006,145 + -1.6 3,006,145 + -0.3 3,006,145 + +0.5 3,006,145 + -0.5 3,006,145 + +0.7 3,006,146 - +0.0 3,006,146 - -0.5 3,006,146 - +0.4 3,006,146 - +0.5 3,006,146 - +0.4 3,006,146 - -0.1 3,006,146 - +0.5 3,006,201 - +0.3 3,006,201 - +0.3 3,006,272 + -3.1 3,006,272 + -0.8 3,006,273 - +0.2 3,006,623 + Pf6N2E2_2544 0.38 -1.8 3,006,674 + Pf6N2E2_2544 0.43 -1.6 3,006,674 + Pf6N2E2_2544 0.43 +0.6 3,006,675 - Pf6N2E2_2544 0.43 -2.2 3,006,675 - Pf6N2E2_2544 0.43 +0.2 3,006,675 - Pf6N2E2_2544 0.43 -0.7 3,006,830 - Pf6N2E2_2544 0.56 -1.1 3,006,981 - Pf6N2E2_2544 0.68 -1.2 3,007,058 + Pf6N2E2_2544 0.75 +0.7 3,007,059 - Pf6N2E2_2544 0.75 -1.5 3,007,061 + Pf6N2E2_2544 0.75 +0.5 3,007,062 - Pf6N2E2_2544 0.75 +0.4 3,007,062 - Pf6N2E2_2544 0.75 +0.3 3,007,202 + Pf6N2E2_2544 0.87 -0.6 3,007,202 + Pf6N2E2_2544 0.87 -0.8 3,007,202 + Pf6N2E2_2544 0.87 -1.3 3,007,203 - Pf6N2E2_2544 0.87 +0.2 3,007,203 - Pf6N2E2_2544 0.87 -1.9 3,007,203 - Pf6N2E2_2544 0.87 -1.1 3,007,203 - Pf6N2E2_2544 0.87 -0.8 3,007,517 + -0.1 3,007,518 - +0.8 3,007,518 - +0.4 3,007,518 - +0.1 3,007,518 - +0.2 3,007,756 + -1.2 3,007,757 - +0.6 3,007,813 + Pf6N2E2_2546 0.29 -0.5 3,007,813 + Pf6N2E2_2546 0.29 +1.4 3,007,813 + Pf6N2E2_2546 0.29 -0.7 3,007,904 + Pf6N2E2_2546 0.74 +0.3 3,007,904 + Pf6N2E2_2546 0.74 +2.0 3,007,932 + Pf6N2E2_2546 0.88 +0.2 3,007,932 + Pf6N2E2_2546 0.88 +0.9 3,007,947 + -0.7 3,007,947 + -0.4 3,007,947 + +0.2 3,007,947 + -1.2 3,007,947 + -0.0 3,007,948 - +0.8 3,007,948 - +0.6 3,007,948 - -0.2 3,008,044 - -0.2 3,008,044 - -0.5 3,008,104 - +0.3 3,008,104 - +0.4 3,008,238 + Pf6N2E2_2547 0.35 +0.6 3,008,238 + Pf6N2E2_2547 0.35 -0.7 3,008,238 + Pf6N2E2_2547 0.35 -0.4 3,008,238 + Pf6N2E2_2547 0.35 -0.0 3,008,238 + Pf6N2E2_2547 0.35 +0.2 3,008,238 + Pf6N2E2_2547 0.35 -0.4 3,008,239 - Pf6N2E2_2547 0.35 -0.5 3,008,239 - Pf6N2E2_2547 0.35 +1.7 3,008,240 + Pf6N2E2_2547 0.35 -0.1 3,008,240 + Pf6N2E2_2547 0.35 +0.3 3,008,240 + Pf6N2E2_2547 0.35 -0.1 3,008,240 + Pf6N2E2_2547 0.35 +0.1 3,008,240 + Pf6N2E2_2547 0.35 +0.3 3,008,240 + Pf6N2E2_2547 0.35 +1.2 3,008,240 + Pf6N2E2_2547 0.35 -1.3 3,008,240 + Pf6N2E2_2547 0.35 -0.5 3,008,240 + Pf6N2E2_2547 0.35 -0.9 3,008,240 + Pf6N2E2_2547 0.35 -0.2 3,008,241 - Pf6N2E2_2547 0.35 -0.4 3,008,241 - Pf6N2E2_2547 0.35 -0.3 3,008,241 - Pf6N2E2_2547 0.35 +0.1 3,008,241 - Pf6N2E2_2547 0.35 +0.3 3,008,253 - Pf6N2E2_2547 0.39 +0.5 3,008,261 + Pf6N2E2_2547 0.41 +0.9 3,008,276 + Pf6N2E2_2547 0.45 +0.8 3,008,276 + Pf6N2E2_2547 0.45 +2.5 3,008,277 - Pf6N2E2_2547 0.45 +0.7
Or see this region's nucleotide sequence