Experiment: acetate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2518 and Ga0059261_2519 are separated by 188 nucleotides Ga0059261_2519 and Ga0059261_2520 are separated by 49 nucleotides Ga0059261_2520 and Ga0059261_2521 are separated by 22 nucleotides
Ga0059261_2518: Ga0059261_2518 - Metal-dependent hydrolase, at 2,609,913 to 2,610,725
_2518
Ga0059261_2519: Ga0059261_2519 - aspartate kinase (EC 2.7.2.4), at 2,610,914 to 2,612,173
_2519
Ga0059261_2520: Ga0059261_2520 - 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64), at 2,612,223 to 2,612,960
_2520
Ga0059261_2521: Ga0059261_2521 - hypothetical protein, at 2,612,983 to 2,613,543
_2521
Position (kb)
2610
2611
2612
2613 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2609.925 kb on - strand at 2609.999 kb on + strand, within Ga0059261_2518 at 2610.186 kb on + strand, within Ga0059261_2518 at 2610.186 kb on + strand, within Ga0059261_2518 at 2610.186 kb on + strand, within Ga0059261_2518 at 2610.186 kb on + strand, within Ga0059261_2518 at 2610.186 kb on + strand, within Ga0059261_2518 at 2610.186 kb on + strand, within Ga0059261_2518 at 2610.187 kb on - strand, within Ga0059261_2518 at 2610.187 kb on - strand, within Ga0059261_2518 at 2610.187 kb on - strand, within Ga0059261_2518 at 2610.187 kb on - strand, within Ga0059261_2518 at 2610.188 kb on + strand, within Ga0059261_2518 at 2610.188 kb on + strand, within Ga0059261_2518 at 2610.188 kb on + strand, within Ga0059261_2518 at 2610.189 kb on - strand, within Ga0059261_2518 at 2610.306 kb on + strand, within Ga0059261_2518 at 2610.307 kb on - strand, within Ga0059261_2518 at 2610.307 kb on - strand, within Ga0059261_2518 at 2610.307 kb on - strand, within Ga0059261_2518 at 2610.307 kb on - strand, within Ga0059261_2518 at 2610.356 kb on + strand, within Ga0059261_2518 at 2610.357 kb on - strand at 2610.560 kb on + strand, within Ga0059261_2518 at 2610.560 kb on + strand, within Ga0059261_2518 at 2610.560 kb on + strand, within Ga0059261_2518 at 2610.560 kb on + strand, within Ga0059261_2518 at 2610.561 kb on - strand, within Ga0059261_2518 at 2610.561 kb on - strand, within Ga0059261_2518 at 2610.561 kb on - strand, within Ga0059261_2518 at 2610.561 kb on - strand, within Ga0059261_2518 at 2610.561 kb on - strand, within Ga0059261_2518 at 2610.561 kb on - strand, within Ga0059261_2518 at 2610.561 kb on - strand, within Ga0059261_2518 at 2610.561 kb on - strand, within Ga0059261_2518 at 2610.605 kb on + strand, within Ga0059261_2518 at 2610.605 kb on + strand, within Ga0059261_2518 at 2610.605 kb on + strand, within Ga0059261_2518 at 2610.605 kb on + strand, within Ga0059261_2518 at 2610.605 kb on + strand, within Ga0059261_2518 at 2610.605 kb on + strand, within Ga0059261_2518 at 2610.605 kb on + strand, within Ga0059261_2518 at 2610.606 kb on - strand, within Ga0059261_2518 at 2610.606 kb on - strand, within Ga0059261_2518 at 2610.606 kb on - strand, within Ga0059261_2518 at 2610.606 kb on - strand, within Ga0059261_2518 at 2610.606 kb on - strand, within Ga0059261_2518 at 2610.606 kb on - strand, within Ga0059261_2518 at 2610.606 kb on - strand, within Ga0059261_2518 at 2610.606 kb on - strand, within Ga0059261_2518 at 2610.745 kb on + strand at 2610.745 kb on + strand at 2610.745 kb on + strand at 2610.746 kb on - strand at 2610.746 kb on - strand at 2610.746 kb on - strand at 2610.820 kb on + strand at 2610.820 kb on + strand at 2610.820 kb on + strand at 2610.820 kb on + strand at 2610.820 kb on + strand at 2610.820 kb on + strand at 2610.820 kb on + strand at 2610.820 kb on + strand at 2610.820 kb on + strand at 2610.820 kb on + strand at 2610.820 kb on + strand at 2610.821 kb on - strand at 2610.821 kb on - strand at 2610.821 kb on - strand at 2610.821 kb on - strand at 2610.821 kb on - strand at 2610.821 kb on - strand at 2610.821 kb on - strand at 2610.821 kb on - strand at 2610.821 kb on - strand at 2610.821 kb on - strand at 2610.821 kb on - strand at 2610.821 kb on - strand at 2610.821 kb on - strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.883 kb on + strand at 2610.884 kb on - strand at 2610.884 kb on - strand at 2610.884 kb on - strand at 2610.884 kb on - strand at 2610.884 kb on - strand at 2610.884 kb on - strand at 2610.884 kb on - strand at 2610.884 kb on - strand at 2610.884 kb on - strand at 2610.915 kb on + strand at 2610.949 kb on - strand at 2610.949 kb on - strand at 2610.956 kb on - strand at 2612.212 kb on - strand at 2613.015 kb on + strand at 2613.015 kb on + strand at 2613.015 kb on + strand at 2613.015 kb on + strand at 2613.016 kb on - strand at 2613.133 kb on + strand, within Ga0059261_2521 at 2613.133 kb on + strand, within Ga0059261_2521 at 2613.133 kb on + strand, within Ga0059261_2521 at 2613.133 kb on + strand, within Ga0059261_2521 at 2613.134 kb on - strand, within Ga0059261_2521 at 2613.134 kb on - strand, within Ga0059261_2521
Per-strain Table
Position Strand Gene LocusTag Fraction acetate 20 mM remove 2,609,925 - -0.1 2,609,999 + Ga0059261_2518 0.11 +0.1 2,610,186 + Ga0059261_2518 0.34 -0.3 2,610,186 + Ga0059261_2518 0.34 -0.4 2,610,186 + Ga0059261_2518 0.34 +0.1 2,610,186 + Ga0059261_2518 0.34 +0.4 2,610,186 + Ga0059261_2518 0.34 +0.3 2,610,186 + Ga0059261_2518 0.34 +0.4 2,610,187 - Ga0059261_2518 0.34 -0.2 2,610,187 - Ga0059261_2518 0.34 +0.3 2,610,187 - Ga0059261_2518 0.34 -0.3 2,610,187 - Ga0059261_2518 0.34 +0.0 2,610,188 + Ga0059261_2518 0.34 +0.6 2,610,188 + Ga0059261_2518 0.34 +0.3 2,610,188 + Ga0059261_2518 0.34 -0.2 2,610,189 - Ga0059261_2518 0.34 -0.1 2,610,306 + Ga0059261_2518 0.48 -0.4 2,610,307 - Ga0059261_2518 0.48 +0.8 2,610,307 - Ga0059261_2518 0.48 -0.5 2,610,307 - Ga0059261_2518 0.48 +0.2 2,610,307 - Ga0059261_2518 0.48 -1.3 2,610,356 + Ga0059261_2518 0.54 -0.6 2,610,357 - -0.7 2,610,560 + Ga0059261_2518 0.80 +0.7 2,610,560 + Ga0059261_2518 0.80 +0.3 2,610,560 + Ga0059261_2518 0.80 +0.2 2,610,560 + Ga0059261_2518 0.80 -0.3 2,610,561 - Ga0059261_2518 0.80 +0.6 2,610,561 - Ga0059261_2518 0.80 -1.9 2,610,561 - Ga0059261_2518 0.80 +0.1 2,610,561 - Ga0059261_2518 0.80 +1.1 2,610,561 - Ga0059261_2518 0.80 -0.0 2,610,561 - Ga0059261_2518 0.80 -0.1 2,610,561 - Ga0059261_2518 0.80 -0.2 2,610,561 - Ga0059261_2518 0.80 -0.5 2,610,605 + Ga0059261_2518 0.85 +0.5 2,610,605 + Ga0059261_2518 0.85 -0.4 2,610,605 + Ga0059261_2518 0.85 +0.0 2,610,605 + Ga0059261_2518 0.85 -0.1 2,610,605 + Ga0059261_2518 0.85 -1.0 2,610,605 + Ga0059261_2518 0.85 -1.2 2,610,605 + Ga0059261_2518 0.85 -2.1 2,610,606 - Ga0059261_2518 0.85 +0.4 2,610,606 - Ga0059261_2518 0.85 +0.1 2,610,606 - Ga0059261_2518 0.85 +1.8 2,610,606 - Ga0059261_2518 0.85 +0.4 2,610,606 - Ga0059261_2518 0.85 +0.5 2,610,606 - Ga0059261_2518 0.85 +1.9 2,610,606 - Ga0059261_2518 0.85 -0.2 2,610,606 - Ga0059261_2518 0.85 +0.1 2,610,745 + +0.3 2,610,745 + +1.3 2,610,745 + +0.1 2,610,746 - +0.6 2,610,746 - +1.4 2,610,746 - +0.4 2,610,820 + -0.2 2,610,820 + -1.5 2,610,820 + -0.2 2,610,820 + -0.2 2,610,820 + +0.0 2,610,820 + -1.3 2,610,820 + +0.6 2,610,820 + -0.3 2,610,820 + -0.2 2,610,820 + +0.4 2,610,820 + -0.7 2,610,821 - -1.4 2,610,821 - -0.2 2,610,821 - -0.1 2,610,821 - +0.3 2,610,821 - +0.5 2,610,821 - +0.2 2,610,821 - -0.3 2,610,821 - +1.3 2,610,821 - +0.5 2,610,821 - +0.1 2,610,821 - +0.0 2,610,821 - +0.3 2,610,821 - -1.3 2,610,883 + -0.7 2,610,883 + -0.1 2,610,883 + -0.2 2,610,883 + -0.6 2,610,883 + +0.3 2,610,883 + -0.1 2,610,883 + -0.7 2,610,883 + +0.1 2,610,883 + +0.5 2,610,883 + -0.5 2,610,883 + -0.5 2,610,883 + +0.3 2,610,883 + -1.5 2,610,883 + +1.7 2,610,884 - -0.1 2,610,884 - +1.0 2,610,884 - -0.7 2,610,884 - -0.2 2,610,884 - -0.2 2,610,884 - -0.3 2,610,884 - +0.0 2,610,884 - +0.7 2,610,884 - +0.0 2,610,915 + -0.1 2,610,949 - +0.4 2,610,949 - +0.9 2,610,956 - +0.3 2,612,212 - -1.9 2,613,015 + +0.0 2,613,015 + +0.5 2,613,015 + +1.0 2,613,015 + +0.4 2,613,016 - -0.4 2,613,133 + Ga0059261_2521 0.27 +0.3 2,613,133 + Ga0059261_2521 0.27 +0.5 2,613,133 + Ga0059261_2521 0.27 -0.9 2,613,133 + Ga0059261_2521 0.27 -1.2 2,613,134 - Ga0059261_2521 0.27 -0.8 2,613,134 - Ga0059261_2521 0.27 +0.3
Or see this region's nucleotide sequence