Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1897

Experiment: acetate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate 20 mM
2,006,394	+		Ga0059261_1896	0.50	+0.8
2,006,394	+		Ga0059261_1896	0.50	-0.1
2,006,394	+		Ga0059261_1896	0.50	-0.8
2,006,395	-		Ga0059261_1896	0.50	-0.0
2,006,395	-		Ga0059261_1896	0.50	-0.7
2,006,395	-		Ga0059261_1896	0.50	-1.4
2,006,537	-		Ga0059261_1896	0.59	-0.2
2,006,776	+		Ga0059261_1896	0.74	-0.3
2,006,777	-		Ga0059261_1896	0.74	-0.2
2,006,777	-		Ga0059261_1896	0.74	-0.0
2,006,777	-		Ga0059261_1896	0.74	-0.4
2,006,777	-		Ga0059261_1896	0.74	+0.2
2,006,863	+		Ga0059261_1896	0.80	-1.2
2,006,864	-		Ga0059261_1896	0.80	-0.3
2,006,864	-		Ga0059261_1896	0.80	+0.2
2,006,864	-		Ga0059261_1896	0.80	-0.5
2,006,864	-		Ga0059261_1896	0.80	+0.1
2,007,007	-		Ga0059261_1896	0.89	+0.3
2,007,111	+				+2.0
2,007,111	+				-0.2
2,007,111	+				+0.0
2,007,111	+				-0.2
2,007,111	+				-0.7
2,007,111	+				+0.5
2,007,112	-				-0.3
2,007,112	-				-0.1
2,007,112	-				+0.5
2,007,112	-				+0.9
2,007,112	-				+0.1
2,007,112	-				+0.3
2,007,112	-				-0.3
2,007,190	+				-1.0
2,007,191	-				-1.3
2,007,563	+		Ga0059261_1897	0.31	+0.5
2,007,563	+		Ga0059261_1897	0.31	-1.2
2,007,563	+		Ga0059261_1897	0.31	-1.5
2,007,563	+		Ga0059261_1897	0.31	+0.1
2,007,563	+		Ga0059261_1897	0.31	+0.0
2,007,563	+		Ga0059261_1897	0.31	-0.2
2,007,563	+		Ga0059261_1897	0.31	+0.2
2,007,563	+		Ga0059261_1897	0.31	+0.6
2,007,564	-		Ga0059261_1897	0.31	-1.0
2,007,564	-		Ga0059261_1897	0.31	-0.0
2,007,564	-		Ga0059261_1897	0.31	-0.3
2,007,564	-		Ga0059261_1897	0.31	+0.1
2,007,564	-		Ga0059261_1897	0.31	-0.7
2,007,564	-		Ga0059261_1897	0.31	-0.8
2,007,564	-		Ga0059261_1897	0.31	-1.0
2,007,564	-		Ga0059261_1897	0.31	+1.6
2,007,878	+		Ga0059261_1897	0.73	-1.1
2,007,878	+		Ga0059261_1897	0.73	+0.0
2,007,879	-		Ga0059261_1897	0.73	-1.4
2,007,943	+		Ga0059261_1897	0.82	-0.2
2,007,943	+		Ga0059261_1897	0.82	-0.1
2,007,944	-		Ga0059261_1897	0.82	+0.1
2,007,944	-		Ga0059261_1897	0.82	+0.4
2,007,944	-		Ga0059261_1897	0.82	+0.4
2,007,944	-		Ga0059261_1897	0.82	+0.4
2,008,014	-				+0.6
2,008,042	-				+0.2
2,008,042	-				+0.3
2,008,123	-				+0.3
2,008,142	+				-0.6
2,008,142	+				+0.7
2,008,177	+				+0.2
2,008,178	-				+0.5
2,008,178	-				-0.9
2,008,178	-				-0.2
2,008,207	+				-0.5
2,008,207	+				+0.2
2,008,207	+				-0.1
2,008,219	+				+0.0
2,008,219	+				+0.4
2,008,220	-				-0.3
2,008,220	-				+0.3
2,008,258	+				+0.6
2,008,258	+				+0.3
2,008,258	+				-0.6
2,008,258	+				-0.0
2,008,258	+				+0.2
2,008,259	-				-0.2
2,008,259	-				+1.5
2,008,259	-				+0.0
2,008,259	-				-0.3
2,008,259	-				-0.2
2,008,366	+				+0.0
2,008,366	+				-0.5
2,008,367	-				-0.3
2,008,367	-				-0.1
2,008,402	+				-0.1
2,008,402	+				-0.5
2,008,402	+				+0.2
2,008,405	+				+0.3
2,008,423	+				-0.4
2,008,423	+				-0.8
2,008,423	+				-0.5
2,008,423	+				-0.3
2,008,423	+				+0.4
2,008,423	+				-0.2
2,008,423	+				-0.7
2,008,423	+				-0.4
2,008,423	+				+1.6
2,008,423	+				-0.1
2,008,423	+				+0.0
2,008,423	+				-0.2
2,008,423	+				-0.0
2,008,423	+				-2.2
2,008,423	+				+0.4
2,008,424	-				+0.2
2,008,424	-				-0.5
2,008,424	-				-0.6
2,008,424	-				-0.0
2,008,424	-				+0.8
2,008,424	-				-0.4
2,008,424	-				-0.0
2,008,424	-				+0.6
2,008,424	-				+0.0
2,008,424	-				+1.3
2,008,456	+				-0.6
2,008,456	+				+0.1
2,008,456	+				+0.9
2,008,456	+				-0.5
2,008,456	+				-0.6
2,008,457	-				-0.3
2,008,457	-				-2.7
2,008,478	+		Ga0059261_1898	0.11	+0.5
2,008,478	+		Ga0059261_1898	0.11	+0.7
2,008,478	+		Ga0059261_1898	0.11	-0.3
2,008,478	+		Ga0059261_1898	0.11	+0.3
2,008,478	+		Ga0059261_1898	0.11	+0.2
2,008,478	+		Ga0059261_1898	0.11	-0.4
2,008,478	+		Ga0059261_1898	0.11	+0.5
2,008,478	+		Ga0059261_1898	0.11	+1.2
2,008,478	+		Ga0059261_1898	0.11	+0.1
2,008,478	+		Ga0059261_1898	0.11	+0.2
2,008,478	+		Ga0059261_1898	0.11	-0.2
2,008,478	+		Ga0059261_1898	0.11	+0.2
2,008,479	-		Ga0059261_1898	0.11	+0.1
2,008,479	-				+0.7
2,008,479	-		Ga0059261_1898	0.11	+0.6
2,008,479	-		Ga0059261_1898	0.11	+0.1
2,008,479	-		Ga0059261_1898	0.11	-0.0
2,008,479	-		Ga0059261_1898	0.11	-0.0
2,008,479	-		Ga0059261_1898	0.11	+0.1
2,008,479	-		Ga0059261_1898	0.11	-0.2
2,008,479	-		Ga0059261_1898	0.11	+0.3
2,008,479	-		Ga0059261_1898	0.11	-2.0
2,008,479	-		Ga0059261_1898	0.11	+0.7
2,008,479	-		Ga0059261_1898	0.11	+0.1
2,008,479	-		Ga0059261_1898	0.11	-0.1
2,008,558	+		Ga0059261_1898	0.13	-1.5
2,008,594	+		Ga0059261_1898	0.15	+0.1
2,008,594	+		Ga0059261_1898	0.15	+0.0
2,008,594	+		Ga0059261_1898	0.15	+0.6
2,008,594	+		Ga0059261_1898	0.15	-0.2
2,008,594	+		Ga0059261_1898	0.15	-0.8
2,008,594	+		Ga0059261_1898	0.15	-0.0
2,008,595	-		Ga0059261_1898	0.15	+0.1
2,008,595	-		Ga0059261_1898	0.15	-0.4
2,008,595	-		Ga0059261_1898	0.15	+0.7
2,008,595	-		Ga0059261_1898	0.15	-0.5
2,008,595	-				+0.9
2,008,595	-		Ga0059261_1898	0.15	+0.3
2,008,595	-		Ga0059261_1898	0.15	+0.3
2,008,600	+		Ga0059261_1898	0.15	+0.3
2,008,600	+		Ga0059261_1898	0.15	-0.0
2,008,600	+		Ga0059261_1898	0.15	+0.5
2,008,600	+		Ga0059261_1898	0.15	+0.7
2,008,601	-		Ga0059261_1898	0.15	+0.1
2,008,601	-		Ga0059261_1898	0.15	-0.7
2,008,638	+		Ga0059261_1898	0.16	+0.6
2,008,639	-		Ga0059261_1898	0.16	+0.2
2,008,639	-		Ga0059261_1898	0.16	-1.2
2,008,679	-		Ga0059261_1898	0.18	-0.2
2,008,679	-		Ga0059261_1898	0.18	+0.4
2,008,729	+		Ga0059261_1898	0.19	+0.3
2,008,729	+		Ga0059261_1898	0.19	+0.2
2,008,729	+		Ga0059261_1898	0.19	+0.4
2,008,729	+		Ga0059261_1898	0.19	-0.4
2,008,729	+		Ga0059261_1898	0.19	+1.3
2,008,729	+		Ga0059261_1898	0.19	+0.6
2,008,729	+		Ga0059261_1898	0.19	-0.5
2,008,729	+		Ga0059261_1898	0.19	+0.4
2,008,729	+		Ga0059261_1898	0.19	+0.2
2,008,729	+		Ga0059261_1898	0.19	+0.3
2,008,729	+		Ga0059261_1898	0.19	-0.2
2,008,729	+		Ga0059261_1898	0.19	+0.9
2,008,729	+		Ga0059261_1898	0.19	+0.6
2,008,730	-		Ga0059261_1898	0.19	-0.4
2,008,730	-		Ga0059261_1898	0.19	+0.0
2,008,730	-		Ga0059261_1898	0.19	+0.5
2,008,730	-		Ga0059261_1898	0.19	+1.3
2,008,730	-		Ga0059261_1898	0.19	+0.9
2,008,730	-		Ga0059261_1898	0.19	-0.3
2,008,730	-		Ga0059261_1898	0.19	-0.2
2,008,730	-		Ga0059261_1898	0.19	-1.3
2,008,730	-		Ga0059261_1898	0.19	+0.1
2,008,730	-		Ga0059261_1898	0.19	-0.0
2,008,798	+		Ga0059261_1898	0.22	-0.5
2,008,798	+		Ga0059261_1898	0.22	-0.3
2,008,798	+		Ga0059261_1898	0.22	+1.1
2,008,799	-		Ga0059261_1898	0.22	+0.2
2,008,799	-		Ga0059261_1898	0.22	+0.1
2,008,799	-		Ga0059261_1898	0.22	-0.9
2,008,799	-		Ga0059261_1898	0.22	-0.2
2,008,799	-		Ga0059261_1898	0.22	+0.3
2,008,801	+		Ga0059261_1898	0.22	-0.3
2,008,801	+		Ga0059261_1898	0.22	-0.6
2,008,802	-		Ga0059261_1898	0.22	-0.2
2,008,802	-		Ga0059261_1898	0.22	-0.6
2,008,802	-		Ga0059261_1898	0.22	-0.1
2,008,802	-		Ga0059261_1898	0.22	-0.1
2,008,802	-		Ga0059261_1898	0.22	+1.3
2,008,837	+		Ga0059261_1898	0.23	-1.6
2,008,837	+		Ga0059261_1898	0.23	+0.2
2,008,837	+		Ga0059261_1898	0.23	+0.1
2,008,838	-		Ga0059261_1898	0.23	+0.9
2,008,838	-		Ga0059261_1898	0.23	-0.4
2,008,840	+		Ga0059261_1898	0.23	-2.1
2,008,840	+		Ga0059261_1898	0.23	-0.2
2,008,840	+		Ga0059261_1898	0.23	-0.5
2,008,841	-		Ga0059261_1898	0.23	+0.5
2,008,841	-		Ga0059261_1898	0.23	-0.4
2,008,967	+		Ga0059261_1898	0.28	+0.1
2,008,968	-		Ga0059261_1898	0.28	-2.5
2,008,968	-		Ga0059261_1898	0.28	+0.0
2,009,017	+		Ga0059261_1898	0.29	-0.2
2,009,017	+		Ga0059261_1898	0.29	+0.1
2,009,017	+		Ga0059261_1898	0.29	-1.2
2,009,017	+		Ga0059261_1898	0.29	+0.4
2,009,017	+		Ga0059261_1898	0.29	-0.7
2,009,018	-		Ga0059261_1898	0.30	+0.3
2,009,018	-		Ga0059261_1898	0.30	+0.1
2,009,018	-		Ga0059261_1898	0.30	+0.0