Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34295
Experiment: Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,298,410 | + | -1.0 | |||
3,298,605 | - | BPHYT_RS34290 | 0.21 | -0.5 | |
3,298,651 | + | BPHYT_RS34290 | 0.27 | -0.0 | |
3,298,795 | + | BPHYT_RS34290 | 0.46 | -0.4 | |
3,298,907 | - | BPHYT_RS34290 | 0.61 | +0.2 | |
3,298,961 | + | BPHYT_RS34290 | 0.68 | -0.2 | |
3,299,041 | - | BPHYT_RS34290 | 0.79 | +0.6 | |
3,299,352 | + | BPHYT_RS34295 | 0.14 | -0.6 | |
3,299,885 | + | -1.1 | |||
3,300,058 | + | -0.1 | |||
3,300,151 | - | -0.0 | |||
3,300,682 | + | BPHYT_RS34300 | 0.37 | -0.1 | |
3,300,683 | - | BPHYT_RS34300 | 0.37 | +1.2 |
Or see this region's nucleotide sequence