Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32930
Experiment: Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,967,847 | - | BPHYT_RS32925 | 0.57 | -0.7 | |
2,967,893 | + | BPHYT_RS32925 | 0.60 | -0.1 | |
2,968,300 | - | -0.5 | |||
2,968,341 | - | -0.5 | |||
2,968,430 | - | -0.1 | |||
2,968,481 | + | +0.4 | |||
2,968,751 | - | BPHYT_RS32930 | 0.66 | +0.8 | |
2,968,850 | - | BPHYT_RS32930 | 0.89 | +0.2 | |
2,968,918 | + | -0.6 | |||
2,968,919 | - | +2.1 | |||
2,968,967 | - | +0.2 | |||
2,969,134 | + | BPHYT_RS32935 | 0.24 | -0.7 | |
2,969,255 | - | BPHYT_RS32935 | 0.40 | -0.3 | |
2,969,276 | - | BPHYT_RS32935 | 0.43 | -0.2 | |
2,969,309 | + | BPHYT_RS32935 | 0.47 | +0.2 | |
2,969,497 | + | BPHYT_RS32935 | 0.72 | -0.1 |
Or see this region's nucleotide sequence