Experiment: Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS26510 and BPHYT_RS26515 are separated by 24 nucleotides BPHYT_RS26515 and BPHYT_RS26520 overlap by 2 nucleotides BPHYT_RS26520 and BPHYT_RS26525 are separated by 26 nucleotides BPHYT_RS26525 and BPHYT_RS26530 are separated by 135 nucleotides
BPHYT_RS26510: BPHYT_RS26510 - transcriptional regulator, at 1,516,664 to 1,517,569
_RS26510
BPHYT_RS26515: BPHYT_RS26515 - HAD family hydrolase, at 1,517,594 to 1,518,208
_RS26515
BPHYT_RS26520: BPHYT_RS26520 - hypothetical protein, at 1,518,207 to 1,518,386
_RS26520
BPHYT_RS26525: BPHYT_RS26525 - amino acid ABC transporter substrate-binding protein, at 1,518,413 to 1,519,564
_RS26525
BPHYT_RS26530: BPHYT_RS26530 - amino acid dehydrogenase, at 1,519,700 to 1,520,929
_RS26530
Position (kb) 1518
1519
1520 Strain fitness (log2 ratio) -1
0
1
2 at 1517.595 kb on + strand at 1517.595 kb on + strand at 1517.875 kb on + strand, within BPHYT_RS26515 at 1517.875 kb on + strand, within BPHYT_RS26515 at 1519.246 kb on - strand, within BPHYT_RS26525 at 1519.512 kb on + strand at 1519.512 kb on + strand at 1519.512 kb on + strand at 1519.513 kb on - strand at 1519.825 kb on - strand, within BPHYT_RS26530
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.01 mg/ml remove 1,517,595 + +0.1 1,517,595 + -0.1 1,517,875 + BPHYT_RS26515 0.46 -0.1 1,517,875 + BPHYT_RS26515 0.46 +0.4 1,519,246 - BPHYT_RS26525 0.72 +0.5 1,519,512 + -0.2 1,519,512 + +1.8 1,519,512 + -0.9 1,519,513 - -0.9 1,519,825 - BPHYT_RS26530 0.10 +0.8
Or see this region's nucleotide sequence