Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19025

Experiment: Thallium(I) acetate 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 0.01 mg/ml
4,270,547	-		BPHYT_RS19015	0.85	-0.1
4,270,771	+				-0.7
4,271,216	-		BPHYT_RS19020	0.58	+0.0
4,271,224	+		BPHYT_RS19020	0.59	+0.9
4,271,225	-		BPHYT_RS19020	0.59	+0.6
4,271,225	-		BPHYT_RS19020	0.59	-0.4
4,271,321	+		BPHYT_RS19020	0.76	+0.3
4,271,321	+		BPHYT_RS19020	0.76	-0.0
4,271,321	+		BPHYT_RS19020	0.76	+0.7
4,271,321	+		BPHYT_RS19020	0.76	+0.9
4,271,321	+		BPHYT_RS19020	0.76	+0.0
4,271,321	+		BPHYT_RS19020	0.76	+0.8
4,271,322	-		BPHYT_RS19020	0.76	+1.0
4,271,324	-		BPHYT_RS19020	0.77	+0.5
4,271,324	-				-0.4
4,271,325	+		BPHYT_RS19020	0.77	+0.5
4,271,325	+		BPHYT_RS19020	0.77	+0.3
4,271,325	+		BPHYT_RS19020	0.77	+0.5
4,271,326	-		BPHYT_RS19020	0.77	-0.2
4,271,444	+				+0.7
4,271,444	+				+1.6
4,271,444	+				+0.4
4,271,445	-				+0.8
4,271,445	-				-0.5
4,271,446	+				-0.1
4,271,446	+				+0.2
4,271,446	+				+0.5
4,271,447	-				+0.6
4,271,484	+				+0.4
4,271,493	+				+0.8
4,271,494	-				-0.9
4,271,601	+		BPHYT_RS19025	0.30	+0.7
4,271,601	+		BPHYT_RS19025	0.30	+0.7
4,271,602	-		BPHYT_RS19025	0.30	+0.3
4,271,698	-		BPHYT_RS19025	0.60	+1.6
4,271,698	-		BPHYT_RS19025	0.60	+1.2
4,271,773	+		BPHYT_RS19025	0.83	+1.0
4,271,773	+		BPHYT_RS19025	0.83	+1.1
4,271,773	+		BPHYT_RS19025	0.83	+1.4
4,271,774	-		BPHYT_RS19025	0.84	+1.4
4,271,774	-		BPHYT_RS19025	0.84	+1.6
4,271,807	+				+1.5
4,271,808	-				+1.1
4,271,808	-				+0.9
4,271,841	+				+1.1
4,271,841	+				+1.2
4,271,842	-				+0.8
4,271,842	-				+0.9
4,271,892	-				+0.6
4,271,988	+				+1.5
4,272,173	-				+0.6
4,272,173	-				+0.4
4,272,175	-				+0.3
4,272,210	-				+0.2
4,272,268	+				-1.0
4,272,377	-				+0.3
4,272,404	-				+1.3
4,272,450	-				+0.4
4,272,490	-				+0.3
4,272,523	-				-0.0
4,272,562	+				+1.0
4,272,562	+				-0.2
4,272,563	-				+0.2
4,272,563	-				+0.2
4,272,563	-				+0.3
4,272,587	-				-0.1
4,272,614	-				+0.1
4,272,823	+		BPHYT_RS19030	0.27	-0.4