Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18880

Experiment: Thallium(I) acetate 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 0.01 mg/ml
4,241,582	-		BPHYT_RS18870	0.83	+0.7
4,241,701	+				+0.5
4,241,701	+				+0.0
4,241,701	+				+0.7
4,241,702	-				+0.5
4,241,735	+				+0.5
4,241,736	-				+1.0
4,241,736	-				+1.0
4,242,175	+		BPHYT_RS18875	0.59	+0.7
4,242,176	-		BPHYT_RS18875	0.59	+0.7
4,242,274	+		BPHYT_RS18875	0.72	-0.4
4,242,274	+		BPHYT_RS18875	0.72	+0.7
4,242,275	-		BPHYT_RS18875	0.72	+0.5
4,242,511	-				-0.1
4,242,511	-				-0.4
4,242,574	-				+0.7
4,242,574	-				+0.5
4,242,574	-				+0.4
4,242,909	+		BPHYT_RS18880	0.26	+0.5
4,242,909	+		BPHYT_RS18880	0.26	+0.4
4,242,909	+		BPHYT_RS18880	0.26	+0.8
4,242,910	-		BPHYT_RS18880	0.27	+1.0
4,242,987	+		BPHYT_RS18880	0.32	+0.5
4,242,987	+		BPHYT_RS18880	0.32	+0.4
4,242,987	+		BPHYT_RS18880	0.32	+0.4
4,243,140	+		BPHYT_RS18880	0.42	+0.6
4,243,140	+		BPHYT_RS18880	0.42	+0.9
4,243,140	+		BPHYT_RS18880	0.42	+1.2
4,243,176	+		BPHYT_RS18880	0.44	+0.6
4,243,176	+		BPHYT_RS18880	0.44	+1.4
4,243,176	+		BPHYT_RS18880	0.44	+0.3
4,243,197	+		BPHYT_RS18880	0.46	-0.0
4,243,198	-		BPHYT_RS18880	0.46	+0.1
4,243,203	+		BPHYT_RS18880	0.46	+1.3
4,243,203	+		BPHYT_RS18880	0.46	+0.0
4,243,203	+		BPHYT_RS18880	0.46	+1.8
4,243,204	-		BPHYT_RS18880	0.46	+0.9
4,243,333	-		BPHYT_RS18880	0.54	+1.1
4,243,410	+		BPHYT_RS18880	0.60	+0.7
4,243,410	+		BPHYT_RS18880	0.60	+0.8
4,243,411	-		BPHYT_RS18880	0.60	+0.9
4,243,411	-		BPHYT_RS18880	0.60	+0.9
4,243,723	-		BPHYT_RS18880	0.80	+0.6
4,243,739	-		BPHYT_RS18880	0.81	+1.2
4,243,869	-				-0.4
4,243,893	+				+0.8
4,243,894	-				+0.8
4,243,894	-				+1.0
4,243,936	+				+0.3
4,244,032	+				+0.8
4,244,033	-				-0.2
4,244,130	-				-0.1
4,244,227	+		BPHYT_RS18885	0.23	+0.5
4,244,228	-		BPHYT_RS18885	0.23	+0.5
4,244,228	-		BPHYT_RS18885	0.23	+0.3
4,244,547	-		BPHYT_RS18885	0.67	+1.2
4,244,547	-		BPHYT_RS18885	0.67	+0.6
4,244,726	+				+1.0
4,244,727	-				+0.7
4,244,933	+		BPHYT_RS18890	0.32	+0.8
4,244,933	+		BPHYT_RS18890	0.32	+0.5
4,244,934	-		BPHYT_RS18890	0.32	+0.8